Transcript Information: S_Transcript_19950.p1


Annotated TAIR IDAT5G67385.1
Annotated Gene NamePhototropic-responsive NPH3 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26884754-26887083 | Forward length=604
E-Value1.9E-116
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.00845311691
Replicate 244.277736284392
Replicate 349.413813575716
Condition 2: 8 Hour
Replicate 133.238194563256
Replicate 238.417864215806
Replicate 343.513730283272
Condition 3: 24 Hour
Replicate 164.781378627279
Replicate 256.503226792066
Replicate 366.620986256272


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_19950.p1 GENE.S_Transcript_19950~~S_Transcript_19950.p1 ORF type:complete len:290 (+),score=38.50,NPH3|PF03000.10|1.9e+03,NPH3|PF03000.10|3.3e-11,BTB|PF00651.27|2e-08 S_Transcript_19950:483-1352(+)
ATGTCTTCTAAGAATAAGGAATCCATGTCGTCTGCCATGAAGAGGACTAGTGAATGGATATTCTCCCAGGAAATTCCTAGTGATGTTACTATTCAAATTGGTGACGTTTCCTTTTCCTTACACAAGTTCCCGCTAGTGTCGAAAAGTGGACGAATAAGGAAATTGTTGTCAGAATGTAACAGTACTGATCTTTCAGTCATTGAACTCTCGGACATTCCGGGAGGGCCAGAAGCTTTTGAAGTAGCGGCAAAATTCTGTTATGGGATAAACTTTGAGATTAGCACTGAGAACATTGCCATGCTTCGCTGCGTGGCTGAGTATCTTGAGATGACAGAGGATAATGCGGTTGGAAACCTTATTGGAAGGGCAGAGGCTTACTTGAATGAAGTAGCTCTTAAGAGCCTATCCACTTGTGTTTCGGTTCTGCTTGCCTCGGAAAACCTCCTGCCTATGGCAGAGCAAATTAAGTTGGTGGGCCGTTGCATTGATGCAATAGCTTATTTAGCCTGCAAGGATAGCCAATTTTCAGGTACGAGCAGGGCTGAAGCTGGCATTGAAGGTGGAAACTCCTCGTTAGTTCCTCAACAAAAACCCATTGTGGATTGGTGGGCTGAAGATGTGACTATGCTTAGAATAGATATGTTCCAAAGGGTTCTGATAGCTATGACGGCTAGAGGATTTAAGCAATATGCTCTTGGTCCCATCCTCATGCTCTATGCTCAAAAGTCTCTAAGAGGTTTGGTGAGATGCCTTCCTAAATCTGTTAATTGCTTTTTTATTTTGTATCTTCTGATCTTTAGCTCTTTTGTTTCTCCAGACGAAAATTTTTGTGGTAGTTTTCTGAGACAAATAAAACTTTTTACACACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_19950.p1 GENE.S_Transcript_19950~~S_Transcript_19950.p1 ORF type:complete len:290 (+),score=38.50,NPH3|PF03000.10|1.9e+03,NPH3|PF03000.10|3.3e-11,BTB|PF00651.27|2e-08 S_Transcript_19950:483-1352(+)
MSSKNKESMSSAMKRTSEWIFSQEIPSDVTIQIGDVSFSLHKFPLVSKSGRIRKLLSECNSTDLSVIELSDIPGGPEAFEVAAKFCYGINFEISTENIAMLRCVAEYLEMTEDNAVGNLIGRAEAYLNEVALKSLSTCVSVLLASENLLPMAEQIKLVGRCIDAIAYLACKDSQFSGTSRAEAGIEGGNSSLVPQQKPIVDWWAEDVTMLRIDMFQRVLIAMTARGFKQYALGPILMLYAQKSLRGLVRCLPKSVNCFFILYLLIFSSFVSPDENFCGSFLRQIKLFTH*

Click here to download the sequence:
Link to NCBI Protein BLAST