Transcript Information: S_Transcript_199585.p1


Annotated TAIR IDAT2G35130.2
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:14807589-14810072 | Reverse length=613
E-Value2.5E-171
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.4716479430464
Replicate 28.8141665477913
Replicate 311.715484956332
Condition 2: 8 Hour
Replicate 17.8845735911981
Replicate 28.438017352949
Replicate 37.3521161714452
Condition 3: 24 Hour
Replicate 110.082253918736
Replicate 29.5041790481457
Replicate 312.955243652256


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_199585.p1 GENE.S_Transcript_199585~~S_Transcript_199585.p1 ORF type:3prime_partial len:403 (-),score=59.44,PPR_2|PF13041.2|5.6e-08,PPR_2|PF13041.2|0.0032,PPR_2|PF13041.2|2.3e-11,PPR_2|PF13041.2|2.3e-13,PPR_2|PF13041.2|4.3e-11,PPR_2|PF13041.2|1.9e-13,PPR_2|PF13041.2|0.04,PPR|PF01535.16|0.01,PPR|PF01535.16|0.00015,PPR|PF01535.16|0.00021,PPR|PF01535.16|4.6e-06,PPR|PF01535.16|2.1e-07,PPR|PF01535.16|9.3e-06,PPR|PF01535.16|1.5e-05,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|0.0019,PPR_1|PF12854.3|9,PPR_1|PF12854.3|9.7e-05,PPR_1|PF12854.3|2.6e-08,PPR_1|PF12854.3|0.00081,PPR_1|PF12854.3|1.4e-08,PPR_3|PF13812.2|4.3e+02,PPR_3|PF13812.2|0.0074,PPR_3|PF13812.2|0.0038,PPR_3|PF13812.2|0.0016,PPR_3|PF13812.2|0.00028,PPR_3|PF13812.2|0.0015,PPR_3|PF13812.2|0.26 S_Transcript_199585:2-1207(-)
ATGAACCATGTTCCATTATCTATAGTGTGTTATTATCTTCTTCATACTAATGATTATCAGATGTTCTATGCTGATTGTGCAGTATATATCAAAGATAGCAGATGTTGCCGGTGGAAAGTAAGAAGTTGCAAGGTTGGGGCTTCTGAGATGTTGAAGGGTGACGCTATATATGTAGACAGGCGAGGCAACTTCAGAAGCTTTAATCGCAAAAAGTTGTCTAGGAAAAGAGGTGGTGGCTTAAGAGGACGTGGATGGAAATTTGGTTCCGGTTTTATTGATGGAATTTTTCCTGTGCTCAGTCCAATCGCCCAAAAGATTCTTGATCTTGTGCTGAAAGAAGCAGATAGTGACATAATTTGGGCGTCCCTCGACACTCTTCCCAGAACACATTCCACCTGGGATGATATTATTAATGTGGCTGTCCAACTACATATGAACAAAAATTGGGATCCAATTATTGTGCTATGTCAATGGGTACTGTATCGGAGCTTCTTCCAACCAGATATCATGTGCTACAATTTGATGATCGATGCTTTTGGACAAAAATTACACCATATGAAGGCAGAGTCCACATATTTAGAACTTCTAGAGGCTGGTTGCATCCCTACTGAGGATACTTATGCGCTTCTTTTGAGGTCGTACTGTGCGTCTAGATTGTTCACCAAAGCTGAAGCCATTTTCTCTGAAATGCGAAAATTTGGCCTGCCTTCGAGTGCCAACGTATACAATGCATATATAGAAGGATTGATAAAGGGAGGAAACTACCAAAAGTCATTCGAGATATTTGAGAGAATGAGAAGGGAGCACTGCAAACCAACAGCAGAAACTTACACAATTTTGATAAATTTATACGGGAAGGAAAAAAAATCTTATATGGCTCTCAAGCTGTTCAATGAGATGACAACCCAGAAGTGCAAGCCAAATATCTGCACTTACACTGCACTAATTAATGCTTTTGCAAGGGATGGAAATTGTGAGAAAGCAGAGGAGATATTCGAGCTGCTACAAGAAGCTGGTCTTGAGCCTGATGTCTATGCTTATAATGCACTTATGGAGGCTTACAGCCGTGCAGGGTTCCCTAATGGTGCTGCAGAAATTTTTTCACTTATGCAACACATGGGATGCGAACCAGACAAGGCATCATATAACATCATGGTAGATGCCTATGGAAGAGCTGGTTTGGTCGAGGATGCAGAAGAAATGTTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_199585.p1 GENE.S_Transcript_199585~~S_Transcript_199585.p1 ORF type:3prime_partial len:403 (-),score=59.44,PPR_2|PF13041.2|5.6e-08,PPR_2|PF13041.2|0.0032,PPR_2|PF13041.2|2.3e-11,PPR_2|PF13041.2|2.3e-13,PPR_2|PF13041.2|4.3e-11,PPR_2|PF13041.2|1.9e-13,PPR_2|PF13041.2|0.04,PPR|PF01535.16|0.01,PPR|PF01535.16|0.00015,PPR|PF01535.16|0.00021,PPR|PF01535.16|4.6e-06,PPR|PF01535.16|2.1e-07,PPR|PF01535.16|9.3e-06,PPR|PF01535.16|1.5e-05,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|0.0019,PPR_1|PF12854.3|9,PPR_1|PF12854.3|9.7e-05,PPR_1|PF12854.3|2.6e-08,PPR_1|PF12854.3|0.00081,PPR_1|PF12854.3|1.4e-08,PPR_3|PF13812.2|4.3e+02,PPR_3|PF13812.2|0.0074,PPR_3|PF13812.2|0.0038,PPR_3|PF13812.2|0.0016,PPR_3|PF13812.2|0.00028,PPR_3|PF13812.2|0.0015,PPR_3|PF13812.2|0.26 S_Transcript_199585:2-1207(-)
MNHVPLSIVCYYLLHTNDYQMFYADCAVYIKDSRCCRWKVRSCKVGASEMLKGDAIYVDRRGNFRSFNRKKLSRKRGGGLRGRGWKFGSGFIDGIFPVLSPIAQKILDLVLKEADSDIIWASLDTLPRTHSTWDDIINVAVQLHMNKNWDPIIVLCQWVLYRSFFQPDIMCYNLMIDAFGQKLHHMKAESTYLELLEAGCIPTEDTYALLLRSYCASRLFTKAEAIFSEMRKFGLPSSANVYNAYIEGLIKGGNYQKSFEIFERMRREHCKPTAETYTILINLYGKEKKSYMALKLFNEMTTQKCKPNICTYTALINAFARDGNCEKAEEIFELLQEAGLEPDVYAYNALMEAYSRAGFPNGAAEIFSLMQHMGCEPDKASYNIMVDAYGRAGLVEDAEEMF

Click here to download the sequence:
Link to NCBI Protein BLAST