Transcript Information: S_Transcript_199634.p1


Annotated TAIR IDAT2G02750.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:771641-773482 | Reverse length=613
E-Value5E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0807310146266
Replicate 20.67196313373142
Replicate 31.2170333456183
Condition 2: 8 Hour
Replicate 12.7062678067428
Replicate 22.2712536690078
Replicate 32.4886522584496
Condition 3: 24 Hour
Replicate 10.66532640072876
Replicate 21.1504472881395
Replicate 30.64015341129736


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_199634.p1 GENE.S_Transcript_199634~~S_Transcript_199634.p1 ORF type:5prime_partial len:197 (+),score=52.11,PPR|PF01535.16|1.2e-08,PPR|PF01535.16|0.0075,PPR|PF01535.16|0.54,PPR|PF01535.16|78,PPR_2|PF13041.2|2e-10,PPR_2|PF13041.2|0.34,PPR_2|PF13041.2|5,PPR_2|PF13041.2|6.1e+03,PPR_3|PF13812.2|7.9e+03,PPR_3|PF13812.2|2.5e-05,PPR_3|PF13812.2|0.32,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|1.5e+02,PPR_1|PF12854.3|3.3e+03,PPR_1|PF12854.3|0.00095,PPR_1|PF12854.3|7.7,PPR_1|PF12854.3|0.46 S_Transcript_199634:3-593(+)
TTTTCAAGGGCACGCAGGATTTTCGACCAATTCGAAATCAAACCTATTGACCCAGCATTTTGGAATGCAATGATTTCAGGGTATGGAAGAAATGGCGAGGAAGAAGCTGCATTTGAGATTTTCAATTTGATGCGTAAAGAGAATGTTCACCCTAATAGCGCCACTTTCGTTAATGTGCTATCTGTCTGCAGTCACACTGGTAAACTGGACAAAGGATTGCAAGTATTTGAGATGATGAGCAGGGATTACGACCTGACTCCAACTCCTCAGCATTTTGCTTGTGTCATTGACCTGTTTGGCCGTGCTGGATACCTTGAGAAAGCTCAAGAACTTGCACATGGAATGCCAGAGACTTCAGCTTCTGTATTTTCTTCATTGCTTGGTGCTTCTGGACACCACCTGGATTCCCAACTTGGGGAAAACATGGCTGAAAAGCTTTCTGAGTTGGATCCTGAGAATTCAGCTTCCTTAGTTGTTTTGTCGAACATATACGCAGCGATGGGAAGGTGGAAGGATGTGGAGAGGATAAGGAAAATGATTGATGTCAAGGGAGTGGAGAAAAATCCTGGTTATAGTGTAGAAATGACATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_199634.p1 GENE.S_Transcript_199634~~S_Transcript_199634.p1 ORF type:5prime_partial len:197 (+),score=52.11,PPR|PF01535.16|1.2e-08,PPR|PF01535.16|0.0075,PPR|PF01535.16|0.54,PPR|PF01535.16|78,PPR_2|PF13041.2|2e-10,PPR_2|PF13041.2|0.34,PPR_2|PF13041.2|5,PPR_2|PF13041.2|6.1e+03,PPR_3|PF13812.2|7.9e+03,PPR_3|PF13812.2|2.5e-05,PPR_3|PF13812.2|0.32,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|1.5e+02,PPR_1|PF12854.3|3.3e+03,PPR_1|PF12854.3|0.00095,PPR_1|PF12854.3|7.7,PPR_1|PF12854.3|0.46 S_Transcript_199634:3-593(+)
FSRARRIFDQFEIKPIDPAFWNAMISGYGRNGEEEAAFEIFNLMRKENVHPNSATFVNVLSVCSHTGKLDKGLQVFEMMSRDYDLTPTPQHFACVIDLFGRAGYLEKAQELAHGMPETSASVFSSLLGASGHHLDSQLGENMAEKLSELDPENSASLVVLSNIYAAMGRWKDVERIRKMIDVKGVEKNPGYSVEMT*

Click here to download the sequence:
Link to NCBI Protein BLAST