Transcript Information: S_Transcript_199680.p1


Annotated TAIR IDAT5G04020.1
Annotated Gene Namecalmodulin binding
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1081980-1086546 | Reverse length=1495
E-Value2.6E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.42278179219768
Replicate 20.5165201568649
Replicate 30.30840695791974
Condition 2: 8 Hour
Replicate 11.0520050407281
Replicate 20.82304459878593
Replicate 31.1762925935859
Condition 3: 24 Hour
Replicate 10.21917943301599
Replicate 20.17054707707954
Replicate 30.35850732013961


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_199680.p1 GENE.S_Transcript_199680~~S_Transcript_199680.p1 ORF type:5prime_partial len:1196 (+),score=333.16,CaM_binding|PF07839.7|1.8e-09,CaM_binding|PF07839.7|5.6e+03,CaM_binding|PF07839.7|2.9e+03,CaM_binding|PF07839.7|6.7e-21,CaM_binding|PF07839.7|1.7e+03,CaM_binding|PF07839.7|1e-13,CaM_binding|PF07839.7|1.8e-20 S_Transcript_199680:1-3588(+)
GAATGGATGCTTGATTATGCACTTAGGCAGGTAATTTCCAAGCTGGATCCTGATCAGCAAAGAACAGTGGCATCACTTGTAGAAGCATTTGAAACAGTAACCCCTGAGCATCAACAGTACAGCATTAGATGTTATCCCTTGACAAGTGAATATACTCCAGATGTCAGATTGCCCAAACTCACAAGCATAGCACAGAAACAATTTGTTGGAACTAACCAAGAAAGATCCATATCTGATGAACAGGTTCCTCAAAAGCCAGATACTGGATTCCTGCTATCAAGCATAGGCACTCGGGAGCAAAGGACTCTCCATGAAGCTCATGATCATCAAGAGAGGGCATCAGATGAGGAAACTCAGCAAGATGCTGAAAATACTGGATTTCCAGATTCAAATTTGAAATTATCTGAAGACAGCTCAAAATCAACTTCTGTTGACGTGGTGCTTAAGGATCCAACTACTGTGGATGGAAAAACAACTGTTGTCAAAGCCCCTTCTCAAATGCCAATTGAGGATTATGAGATCAGTCTTGCTGGTGAAATGACCACTATCCTCTCTGACAAACAAAAGTATACCAGTATGTGGCGCCTGATCTATCAACATGCCATATCAAGTGAAGCATCAATTGCTGCAAAACAGGGAGGCAATGAAGTTGACGAAGATGAATATGGTGAAGATGCAAGCAAAACCCATGAGATCAATGAGTTCAATTCGACTCAGAGTAATCACAACACAAATCAGAAGGAAAACGAAGACGGCCAGAATGCAGCTTGTGAAAGGAGCAATATTGATCAATCAGCTGCCATCAAGTTGGTGAAAGATGCAATTAGTAAAATCTTACAATGTCATGAGCAGATATCTGATGAACAATCCTTTCAAGACCCACACATTATTGCTGATATTGGAGGAGAACTTGGCCATAGAGGTGCTCCAGTTTCCACTGAAGTAAATTCCAGAGGGAAGAGGGGGGAAAGCCACAGAAGTTTAGACACAGAAGATAAGCTGCACTTAGTGCAGAACACAAATGCCCCACTAGGAAAGCAAGCAAAGCCAGATGAAGTGCAGATATCCCAAGGAAAAACTTCAAAGAGTTATAGCAAGCTGAAAAAATTTGTTGCAGCTGCCAACTTCATCAAGGCTATGGAGAGATTGAAGAGGAGAAGCCCACGCAAGCCACGCTTTCTGTCTCCTGAGGCAGTCTCAGAGGAAGAAAGAGTTCATCTGAGGCATCAAGACATCAATGAAAGGAGGAATGATGAAGAATGGATGCTTGATTATGCACTTAGGAGAAAGGTTATTTCAAACCTGCATCCTGACCAGCAGAGAAAAGTGGCAAAACTTGTAGAAGCATTTGAAGCAATTACACCAGAGCAGAACGACGATTCCACCAGAAGTCAAACTAGAGCTGAACTACCCCCTGACGTTATAGAATCTAAGCATCACAATTCCACATCACATGAGGACAATGTTCAGACATGTCATGATGACATATTCAGCTCGCAGAGTCAGCAAGACAATTATCCCATAGATATTTCAAAATGCAGGACAGAGCAACATGATGAGGATCTTGATTCAGATGGAACCAATTTGCATGCTTACAATCAATTGAGGCCAAAAGTTACAAAAGAGGAGACAGATTCCAACCCGATGTGTGAATCTCTTCAACAAGCTCGTTTAAACAAAGAGACTAAACAAGAAAGTGAGGCTAAGATGAAAAAAAGCATGTTTTCTGACTCACAGAAACATACCACAATGTGGCACCTGATATATCAGCATGTCAAATCAGTCACTTCTGCAGAAACTGGAAGCAACCTAGGTGAAAGAGTGGCCAATGAAGATCTGATGACCAGTGGCAATGCATTATCTGAGACAAATTCGGATGTAGATGATAATGACACAAGTAGTGTGGCCAGTGAACTCACTGAGAACGATGCCATTAAACTGGTAAAAGAGGCCCTTGATGGTATCCTTGATGTGCCACTAGAGCAGGATAATGATTTGCTTTCTAGCAACATCACAGCTGTGCCAGAAGAAGACCAAAGAGCAACAGTAGGAGAAAAGCCTGAGAGAAGCCTGTCCAGGGGGTACAGCAAGCTCAGGAAATTAATTATCTGCAACAAATTTATCAGGACAATGGAGAAGATGAGAAAGTCCTACCCACAGAAGCACCAAAATCTAATGATAAATCCTGACCAAGAATGTGAAAAGGCTCATATAAAGCCTTGTATAGCAGGTGAGAAAAACACAGACAACTGGATGCTTGACTATGCGCTACAGAAAGTTATCGCCGGACTTGCTCCAGTGCAACAAAGAAGAGTTGCCATGTTGGTAGAAGCTTTTGAAAAGGTCAATCCTGATGTCCAAGAAACTGGCCAAGCATTTGATGGCATTAAAAATGAATCCACTGATGGTGGTTCCTCAACTGACAATTCATCGGAGAACTCAAGTGAAGTTCCTGATAGTTCAGTGAAGCTAGGAGACTCACTAGTAACATCTAGCAGTGAAACATACACAGGCAGGGCACCACAAGAAATTAAAGAAGGTACAACTTCAAGAAACGAATGTGAGTTAATAGGGCAAGAATCCAGAAGTGATGAACCTTCTAGCAGCACAGTGGCAACATCTGCTACAATTGAAACCATACCGGATCTTCATGAAGATATGAAAGAATTCAAGTCTGCAGAAGTTCCGCATTCTAAAGTTCCATTAGTGGAAAACAGTTCAAGTGACAAAAAGTTGGATGATTATAATGACCAAGAGACTGAATCAACAGCAGAGCCCTCTCTACATGAAGACTTGGAAGACGACTGCAATTCTAGCACAGAAAATAGCAAGTCCATAAACAGGAAAAGCTATACCAATCTGTGGTGTCTATTAGCCCAGCATCTCAAGTCTGATGTTCCGGAGGAAAAGGAGAAGCAATTACCATGTGAGATCGATGCAGTTGCAGAAAATGCCAAAGTAAGCCATGATGTAGACGTGGAAGTCAAAACTCCAAAGTCAACAAGCTTTGAATTCCAGCAAAAGGAAGCAATTAAGCTGGTACAGGAAGCACTCGATGAAATCCTTTGTCTCCCAGACCAAAAATTTGATGATCAAACCATGCATACTAGTGGAACAGATCAAGAGGTTGGCAATGGAAAACATGCAGATGGAAGGGAGCCATCACCTTCCACGGAAGAACTTGCAGGAGTTGAAACTTTGCAGGACACTGCTGCAATCCCTCAAGAAGAGATTACATCACCGAAAGAAAAGGCACCCAACAGTTACAGCATGCTTTCCAAAGTCATTCTGTGTAAGAGATTTATCAAGGCAATGGACCAAATGCGAAAGCTCAAACCACAAAGTCCTTCATATCAATCTCCACAGCTTCAGTCAGAAGCCGAGAGCTTTCAGTCTCTGCGCCCATCAGCAGCCAATGGGAAGAAAAGCTGGGAGGAGTGGATGCTTGATCATGCAATGCAGCAAGTTGTTGGAAAACTTGCTCCAGCTCAGAAGAAAAAGGTATCATTGCTTGTTCAGGCTTTTGAAACAGTTAGCTCAGAGCCAGAACACAGACCCAGCTGGAAAGTCAAAGCGGCAGCCCTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_199680.p1 GENE.S_Transcript_199680~~S_Transcript_199680.p1 ORF type:5prime_partial len:1196 (+),score=333.16,CaM_binding|PF07839.7|1.8e-09,CaM_binding|PF07839.7|5.6e+03,CaM_binding|PF07839.7|2.9e+03,CaM_binding|PF07839.7|6.7e-21,CaM_binding|PF07839.7|1.7e+03,CaM_binding|PF07839.7|1e-13,CaM_binding|PF07839.7|1.8e-20 S_Transcript_199680:1-3588(+)
EWMLDYALRQVISKLDPDQQRTVASLVEAFETVTPEHQQYSIRCYPLTSEYTPDVRLPKLTSIAQKQFVGTNQERSISDEQVPQKPDTGFLLSSIGTREQRTLHEAHDHQERASDEETQQDAENTGFPDSNLKLSEDSSKSTSVDVVLKDPTTVDGKTTVVKAPSQMPIEDYEISLAGEMTTILSDKQKYTSMWRLIYQHAISSEASIAAKQGGNEVDEDEYGEDASKTHEINEFNSTQSNHNTNQKENEDGQNAACERSNIDQSAAIKLVKDAISKILQCHEQISDEQSFQDPHIIADIGGELGHRGAPVSTEVNSRGKRGESHRSLDTEDKLHLVQNTNAPLGKQAKPDEVQISQGKTSKSYSKLKKFVAAANFIKAMERLKRRSPRKPRFLSPEAVSEEERVHLRHQDINERRNDEEWMLDYALRRKVISNLHPDQQRKVAKLVEAFEAITPEQNDDSTRSQTRAELPPDVIESKHHNSTSHEDNVQTCHDDIFSSQSQQDNYPIDISKCRTEQHDEDLDSDGTNLHAYNQLRPKVTKEETDSNPMCESLQQARLNKETKQESEAKMKKSMFSDSQKHTTMWHLIYQHVKSVTSAETGSNLGERVANEDLMTSGNALSETNSDVDDNDTSSVASELTENDAIKLVKEALDGILDVPLEQDNDLLSSNITAVPEEDQRATVGEKPERSLSRGYSKLRKLIICNKFIRTMEKMRKSYPQKHQNLMINPDQECEKAHIKPCIAGEKNTDNWMLDYALQKVIAGLAPVQQRRVAMLVEAFEKVNPDVQETGQAFDGIKNESTDGGSSTDNSSENSSEVPDSSVKLGDSLVTSSSETYTGRAPQEIKEGTTSRNECELIGQESRSDEPSSSTVATSATIETIPDLHEDMKEFKSAEVPHSKVPLVENSSSDKKLDDYNDQETESTAEPSLHEDLEDDCNSSTENSKSINRKSYTNLWCLLAQHLKSDVPEEKEKQLPCEIDAVAENAKVSHDVDVEVKTPKSTSFEFQQKEAIKLVQEALDEILCLPDQKFDDQTMHTSGTDQEVGNGKHADGREPSPSTEELAGVETLQDTAAIPQEEITSPKEKAPNSYSMLSKVILCKRFIKAMDQMRKLKPQSPSYQSPQLQSEAESFQSLRPSAANGKKSWEEWMLDHAMQQVVGKLAPAQKKKVSLLVQAFETVSSEPEHRPSWKVKAAAL*

Click here to download the sequence:
Link to NCBI Protein BLAST