Transcript Information: S_Transcript_19973.p1


Annotated TAIR IDAT1G09530.1
Annotated Gene Namephytochrome interacting factor 3
Annotated Gene Symbol(s)PIF3, POC1, PAP3
Annotation TypeOrtholog
Chromosome Positionchr1:3077216-3079367 | Forward length=524
E-Value3.3E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.107626205433
Replicate 216.81437265837
Replicate 318.903127439579
Condition 2: 8 Hour
Replicate 112.776445300132
Replicate 211.399458851667
Replicate 310.767476616907
Condition 3: 24 Hour
Replicate 113.504693024288
Replicate 212.313671487883
Replicate 314.444342610859


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_19973.p1 GENE.S_Transcript_19973~~S_Transcript_19973.p1 ORF type:complete len:681 (+),score=127.39,HLH|PF00010.22|1e-13 S_Transcript_19973:408-2450(+)
ATGCCATTAACTGAACTCCTTAAGATGTACAAGGAAAGATTGGATTCCACCTACAAAGCAGCATCATCTTCAACTGATCCATCTTGTAGAACTGATACTGATTGTCTGGAGCTAGTATGGGAAAACGGTCAGATCGTGATGCAAAGTAGTAAAGCTAGAAAAGATCCTGTTCCAAACAATTTCCAAACATTTATACCCAAGTCTCAAGACATTAGGAATGGTCAAGGTTCAAGAATTCCTAAGTTCGGCACTATGGATTCCGTATTGCCTGATTTTTCATTACCTGTTCCTTCTAGTGACATGGGGTTGGATCAAGGCATAGATATGGTATCTTGGTTGAATTATCCTATTGAAGATCAGTTGCACAATGATTGTACATCTGACTTCTTGCACGAGTTATCCGGGGTTACCATAAATGATCTGTCTACTGAGAACCATTTAGCATCCAGAGATAAAAAGAGTACTTCTCATGGTGAAGGTCATACAAGTGTTTTTGATAACAACATGAGCTTCAAATTTGGGAATACGCGCAAGGTCCTCCCAACTACTGAGAAACATACTAGAGATGGTGGTGGTAGTGAGGTGCCACAGTTTTCACTTCCTTTCCAGCATAATGTCCTGAAATCAGGCATTTCCAACGTTACTGGAAGTAATGCAGGAAATCCCGAAAACCTAACTTCCCAAGAATCCATTCCTACTACATCTTCACTATCTGCTTTTACCAGCTTGAGATTGCAGAAGCTAGATGCAGGACAGCCTTGTACTAGTTCTGGCTTTACAAACTTCTCCTATTTTTCACGGCCCATTGTTGCCGCTAAAGCTCATCATCCGACTGTAAACAGCGCAAACAAATTGGAGAATGACAATAAGAGGTGTGCGTTCAGTAGCAATGCTGATTCTAATCTGGTTAGTTGTGGTGCCCAAAAGGATACACTCATCTGTAATCAGCCTGTTGTGTCACTGGTCGATGGAACTTCAAAGTTGTTGCCTGCAAAGTCTACTGAGGAGCTGATGTCTTCTAATCAAGCTACATACCTAGAAGTTGTTGCTAGAAATGATGCATCACAAAATCAAGCATGTGGTACGACAAACACAACTGCAAGGATGGTGGCTGAAAAGAATACAGAGACGGTAGTTTCAACGTCTTCTGTAGGTTCGGGTAACAATGTGGAGACAACTTCAAATGAGCCTGCACATAATTTGAAAAGAAAATATCGTGAAACCGGGGAATCAGAAGGTCCTAGTGAAGAGTTTGAAGAAGAATCCGTGGGTGCAAAAAAAGTTGCTCCTGCTCGAACAGGTGCAAAAAGAAGTCGAGCTGCGGAGGTGCATAATTTATCTGAAAGGAGACGAAGGGATAGAATTAATGAGAAGATGCGTGCACTTCAAGAACTCATACCCAACTGCAATAAAGTCGACAAAGCTTCTATGCTTGATGAGGCCATAGAGTATTTGAAGACACTCCAGCTTCAAGTACAGATGTTGTCAATGGGTACCGGGTTGTACATGCAACCAATGATGATGCCGCCTGTAATGCAACCCATTCACGGGGCACATATGCCACATTTGTCGCCTATGGGGGTCGGAATGGGTATGGGCATGGGCTATGGGATGAATATGCTCGATGTGAATAGCGTTGTGAAAATGATGCCTTTCCAAGGCCCACATTATCCTGTTCCTGGAGCAGGGCCCAACTTTCACGGAATGCCAGGCTCTAGTATTCAAGCTTTTGGGCACCCTGGTCAAGGATTACCAATGGCCATGCAAAGACCACCAGTACTTCCAGTCTCATGTGTTCATTCTGCGAGCATGCCCATGGGACCAAACATACCAGGTGTGGCTGCTGCTACAGATGCCACACATTTAGCTCCACCTAGTAGTTCAAAGGATGTCAGTACTCAAGTGATGTCGAGTCAGGCTTCTAATAAGGCAACAAACGAGGATCTTGAGCATCCTAGTACATCCCACAATCAAGCTCAAGTTGTCAATGCCTCGTCTGAAGCTGCTCATACAATCAGTACAACCAACACTATGCCTAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_19973.p1 GENE.S_Transcript_19973~~S_Transcript_19973.p1 ORF type:complete len:681 (+),score=127.39,HLH|PF00010.22|1e-13 S_Transcript_19973:408-2450(+)
MPLTELLKMYKERLDSTYKAASSSTDPSCRTDTDCLELVWENGQIVMQSSKARKDPVPNNFQTFIPKSQDIRNGQGSRIPKFGTMDSVLPDFSLPVPSSDMGLDQGIDMVSWLNYPIEDQLHNDCTSDFLHELSGVTINDLSTENHLASRDKKSTSHGEGHTSVFDNNMSFKFGNTRKVLPTTEKHTRDGGGSEVPQFSLPFQHNVLKSGISNVTGSNAGNPENLTSQESIPTTSSLSAFTSLRLQKLDAGQPCTSSGFTNFSYFSRPIVAAKAHHPTVNSANKLENDNKRCAFSSNADSNLVSCGAQKDTLICNQPVVSLVDGTSKLLPAKSTEELMSSNQATYLEVVARNDASQNQACGTTNTTARMVAEKNTETVVSTSSVGSGNNVETTSNEPAHNLKRKYRETGESEGPSEEFEEESVGAKKVAPARTGAKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMLSMGTGLYMQPMMMPPVMQPIHGAHMPHLSPMGVGMGMGMGYGMNMLDVNSVVKMMPFQGPHYPVPGAGPNFHGMPGSSIQAFGHPGQGLPMAMQRPPVLPVSCVHSASMPMGPNIPGVAAATDATHLAPPSSSKDVSTQVMSSQASNKATNEDLEHPSTSHNQAQVVNASSEAAHTISTTNTMPS*

Click here to download the sequence:
Link to NCBI Protein BLAST