Transcript Information: S_Transcript_199760.p1


Annotated TAIR IDAT4G20360.1
Annotated Gene NameRAB GTPase Homolog E1B
Annotated Gene Symbol(s)ATRAB8D, ATRABE1B, RABE1b
Annotation TypeOrtholog
Chromosome Positionchr4:10990036-10991466 | Forward length=476
E-Value5.9E-286
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11149.7365255273
Replicate 21251.7562479467
Replicate 31335.5963287924
Condition 2: 8 Hour
Replicate 1741.42006500515
Replicate 2797.77550974035
Replicate 3807.58494792068
Condition 3: 24 Hour
Replicate 11279.4345575955
Replicate 21383.5672848505
Replicate 31324.0273207304


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_199760.p1 GENE.S_Transcript_199760~~S_Transcript_199760.p1 ORF type:complete len:485 (-),score=127.56,GTP_EFTU|PF00009.23|7.3e-57,GTP_EFTU_D3|PF03143.13|1.5e+04,GTP_EFTU_D3|PF03143.13|1.3e+04,GTP_EFTU_D3|PF03143.13|2.2e-35,GTP_EFTU_D2|PF03144.21|2.1e-18,GTP_EFTU_D2|PF03144.21|9.1e+03 S_Transcript_199760:1114-2568(-)
ATGGCACTCTCAACGGCAGCCTCGACCAGGGCAGCCCCAGCACCAGCCCTAACTTGCCAACACCTTCAAACCCCTTCAACCCATCTCCCCAAAATCATCTTCCACTCCAAAACCACCCCTGCAAACTTGACCCTCTCATCTTCCTTCACCCCATCTTTTCTCACAGCCACAACATCCACCACCACAACATCCACAACCCCCACGCGCCGCCTCTTCACGGTCCGCGCCGCGAGAGGGAAATTCGAAAGGAAAAAACCCCATGTAAACATTGGCACAATTGGCCATGTTGACCATGGTAAAACCACCCTCACAGCAGCCTTGACCATGGCCTTAGCCTCAATGGGTAACTCTGCCCCTAAAAAGTATGATGAAATTGATGCTGCCCCTGAGGAAAGGGCTCGTGGTATTACTATTAATACTGCCACTGTTGAGTATGAAACTGAAAATAGACACTATGCTCATGTGGACTGCCCTGGACATGCTGATTATGTTAAAAATATGATCACTGGGGCTGCCCAAATGGATGGTGCTATTCTTGTTGTTTCTGGGGCTGATGGTCCTATGCCTCAAACTAAAGAACATATTTTGCTTGCTAAACAAGTGGGTGTTCCTAATATGGTTGTTTTTCTTAATAAACAGGATCAGGTTGATGATGAGGAGCTTCTTCAGTTGGTTGAATTAGAGGTTAGAGAATTGTTGAGTTCTTATGAGTTTCCTGGTGATGATATTCCTATTATTTCTGGTTCCGCTTTGTTAGCTCTTGAGGAATTAATGAAGAATCCTAGTATTAAGAGAGGGGAGAATAATTGGGTTGATAAGATTTATGAACTTATGGATTCTGTTGATAGTTATATCCCTATCCCTCAAAGACAAACTGAGTTGCCCTTCTTGTTGGCTGTTGAGGATGTTTTTTCAATTACCGGTCGTGGGACTGTTGCCACTGGGAGGGTAGAAAGAGGGACTATTAAGGTTGGTGAGACTGTTGATATTGTTGGTATGAGGGAAACTAGGAATACTACTGTTACTGGGGTTGAGATGTTCCAGAAGCTTCTTGATGAGGCTATGGCTGGTGACAATGTTGGGTTGTTGTTGAGAGGTGTTCAAAAGGCTGATATTCAGAGAGGTATGGTCCTTTCGAAGCCCGGGACTATTACCCCTCACACTAAGTTTGAGGCTATTGTGTATGTCTTGAAGAAGGAAGAGGGTGGTAGACACTCTCCTTTCTTTGCTGGTTACAGGCCTCAGTTCTACATGAGGACTACCGATGTCACTGGCAAGGTGTCTAAGATTATGGATGATAAGGGTGATGAGTCTAAGATGGTTATGCCTGGTGACCGTGTTAAGATGGTTGTCGAGCTCATTGCTCCTGTAGCTATTGAGCAGGGTATGAGGTTCGCTATTAGGGAAGGAGGCAAGACTGTTGGTGCTGGTGTTATCCAGTCCATCATTGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_199760.p1 GENE.S_Transcript_199760~~S_Transcript_199760.p1 ORF type:complete len:485 (-),score=127.56,GTP_EFTU|PF00009.23|7.3e-57,GTP_EFTU_D3|PF03143.13|1.5e+04,GTP_EFTU_D3|PF03143.13|1.3e+04,GTP_EFTU_D3|PF03143.13|2.2e-35,GTP_EFTU_D2|PF03144.21|2.1e-18,GTP_EFTU_D2|PF03144.21|9.1e+03 S_Transcript_199760:1114-2568(-)
MALSTAASTRAAPAPALTCQHLQTPSTHLPKIIFHSKTTPANLTLSSSFTPSFLTATTSTTTTSTTPTRRLFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMGNSAPKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLSSYEFPGDDIPIISGSALLALEELMKNPSIKRGENNWVDKIYELMDSVDSYIPIPQRQTELPFLLAVEDVFSITGRGTVATGRVERGTIKVGETVDIVGMRETRNTTVTGVEMFQKLLDEAMAGDNVGLLLRGVQKADIQRGMVLSKPGTITPHTKFEAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVSKIMDDKGDESKMVMPGDRVKMVVELIAPVAIEQGMRFAIREGGKTVGAGVIQSIIE*

Click here to download the sequence:
Link to NCBI Protein BLAST