Transcript Information: S_Transcript_19982.p2


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value6E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.22513050568893
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.22828416979313
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_19982.p2 GENE.S_Transcript_19982~~S_Transcript_19982.p2 ORF type:complete len:98 (-),score=5.42,gag_pre-integrs|PF13976.2|4.4e-13 S_Transcript_19982:220-513(-)
ATGGCCTCAAACAAAATATTTCCATTAAAAATGCCAATTGAGCACAAGATTGCTCTTAACTGTATCAATGATGAATCAATAATATGGCATTTAAGATTCGGGCATCTAAATTACAAGAGTTTGAAACTCTTGAAACAAAAGGAAATGGTTATTGGTCTCCCTAATATAAATGATGAAAGAAAAATATGTGAGGGCTGCATATATGGAAAAATGCATCGATTACCATTTCCCACATGCATATTCCCACATGGAAATGGTTATTGTGTGAAATTAAGATTGTTGATTTTGCTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_19982.p2 GENE.S_Transcript_19982~~S_Transcript_19982.p2 ORF type:complete len:98 (-),score=5.42,gag_pre-integrs|PF13976.2|4.4e-13 S_Transcript_19982:220-513(-)
MASNKIFPLKMPIEHKIALNCINDESIIWHLRFGHLNYKSLKLLKQKEMVIGLPNINDERKICEGCIYGKMHRLPFPTCIFPHGNGYCVKLRLLILL*

Click here to download the sequence:
Link to NCBI Protein BLAST