Transcript Information: S_Transcript_200107.p1


Annotated TAIR IDAT1G11650.2
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)ATRBP45B, RBP45B
Annotation TypeOrtholog
Chromosome Positionchr1:3914895-3917941 | Forward length=405
E-Value4.1E-128
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 129.526833487208
Replicate 231.886367389693
Replicate 327.596794869621
Condition 2: 8 Hour
Replicate 142.261631175924
Replicate 239.518155991342
Replicate 341.698154438942
Condition 3: 24 Hour
Replicate 119.612559630241
Replicate 224.979821518456
Replicate 324.485634349492


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_200107.p1 GENE.S_Transcript_200107~~S_Transcript_200107.p1 ORF type:internal len:274 (-),score=53.50,RRM_1|PF00076.18|6.2e-13,RRM_1|PF00076.18|2.9e-14,RRM_1|PF00076.18|1.8e-13,RRM_6|PF14259.2|4.6e-06,RRM_6|PF14259.2|8.7e-07,RRM_6|PF14259.2|8.7e-09,RRM_5|PF13893.2|3.8e-05,RRM_5|PF13893.2|0.034,RRM_5|PF13893.2|0.037,RRM_7|PF16367.1|1e+02,RRM_7|PF16367.1|0.99,RRM_7|PF16367.1|0.015 S_Transcript_200107:1-819(-)
CAGCAACAGTACCAGCAACAACAACAACAGCAACAGCAACCACCGGCTAATGCTGATGAGGTCCGTACGCTTTGGATTGGAGATCTTCAGTACTGGATGGACGAGAATTATATTCGTAATTGCTTCGCTCAAACTGGAGAGGTTGCTAATGTTAAAATCATACGTAATAAACAAACCCAACAGTCTGAGTGCTATGGTTTCATTGAATTTACATCTCATGCTGCTGCTGAGAGAATTTTACAGACGTACAACAACACCTTGATGCCGAGTGTTGAGCAAAACTACAGATTGAACTGGGCGTTCTACGGGTCTGGTGACAAACGTGGAGATGATACTTCTGACCACACAATATTTGTTGGGGACTTGGCCGCAGACGTTACTGATTACGTATTGCAAGAGACTTTTAGAGCTCACTATCAATCTGTAAAGGGTGCTAAGGTTGTTATTGATAGGCTTACCGGTAGGTCAAAGGGGTATGGATTTGTTCGTTTTGGAGATGAAAGTGAACAATTACGTGCTATGTCAGAAATGAATGGAGTCATGTGCTCTGGCCGAGCAATGCGTGTTGGAGCAGCTGCAAATAAAAAGAATGGGGGTGGAACAGCCTCTTACCAGAGTACTCCGGGAAGTCAAAATGACAGTGATCCAAATAACACTACTATTTTTGTAGGCAATTTGGATTCCAATGTGACTGATGAACATTTGAGGCAAACTTTTAGTGCTTATGGGGCATTGTTACATGTGAAAATACCAATGGGCAAGCAATGCGGATTTGTTCAATTTGCTAACAGAGCTTCTGCTGAGGAAGCATTAAGGGCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_200107.p1 GENE.S_Transcript_200107~~S_Transcript_200107.p1 ORF type:internal len:274 (-),score=53.50,RRM_1|PF00076.18|6.2e-13,RRM_1|PF00076.18|2.9e-14,RRM_1|PF00076.18|1.8e-13,RRM_6|PF14259.2|4.6e-06,RRM_6|PF14259.2|8.7e-07,RRM_6|PF14259.2|8.7e-09,RRM_5|PF13893.2|3.8e-05,RRM_5|PF13893.2|0.034,RRM_5|PF13893.2|0.037,RRM_7|PF16367.1|1e+02,RRM_7|PF16367.1|0.99,RRM_7|PF16367.1|0.015 S_Transcript_200107:1-819(-)
QQQYQQQQQQQQQPPANADEVRTLWIGDLQYWMDENYIRNCFAQTGEVANVKIIRNKQTQQSECYGFIEFTSHAAAERILQTYNNTLMPSVEQNYRLNWAFYGSGDKRGDDTSDHTIFVGDLAADVTDYVLQETFRAHYQSVKGAKVVIDRLTGRSKGYGFVRFGDESEQLRAMSEMNGVMCSGRAMRVGAAANKKNGGGTASYQSTPGSQNDSDPNNTTIFVGNLDSNVTDEHLRQTFSAYGALLHVKIPMGKQCGFVQFANRASAEEALRA

Click here to download the sequence:
Link to NCBI Protein BLAST