Transcript Information: S_Transcript_20013.p1


Annotated TAIR IDAT1G26460.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9151816-9154407 | Forward length=630
E-Value3.7E-280
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.673455866685
Replicate 218.606285860171
Replicate 315.737801458006
Condition 2: 8 Hour
Replicate 124.09769105836
Replicate 221.402401865339
Replicate 321.280321192306
Condition 3: 24 Hour
Replicate 115.619091695775
Replicate 214.920342621095
Replicate 315.385447087121


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_20013.p1 GENE.S_Transcript_20013~~S_Transcript_20013.p1 ORF type:5prime_partial len:600 (+),score=85.46,PPR_2|PF13041.2|0.0037,PPR_2|PF13041.2|5.4e-05,PPR_2|PF13041.2|13,PPR_2|PF13041.2|78,PPR_2|PF13041.2|0.26,PPR_2|PF13041.2|3.9e-09,PPR_2|PF13041.2|0.00018,PPR_3|PF13812.2|82,PPR_3|PF13812.2|54,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|54,PPR_3|PF13812.2|3.3e+03,PPR_3|PF13812.2|7.3e+03,PPR_3|PF13812.2|91,PPR_3|PF13812.2|68,PPR_3|PF13812.2|0.0046,PPR_3|PF13812.2|0.0094,PPR|PF01535.16|0.8,PPR|PF01535.16|79,PPR|PF01535.16|7.3,PPR|PF01535.16|2e+02,PPR|PF01535.16|0.0054,PPR|PF01535.16|0.06,PPR_1|PF12854.3|0.84,PPR_1|PF12854.3|4.6e+02,PPR_1|PF12854.3|92,PPR_1|PF12854.3|7.4e+03,PPR_1|PF12854.3|0.052,PPR_1|PF12854.3|0.69 S_Transcript_20013:2-1801(+)
ATCAAATCAATCACCACTTTCTCTTTCCTCAATCAAGAACCTCAACTCGACGAACCCCCTACCCCCTCCCCCTCCCCTTCCCCTCTCCCTCCAAATCCGTCCTCAGGCAGCCCACTCTACCACCAAAACTGGCGTAACCCTAACCCTACCACCATCCCAATCTCCTCGACCACCAATCCCCAATCTATAGTCCCCTTAGGGTTCCTCAACCACACGGCTCCCTACCAGATCAAAGCCCTAGCCCAAAGCCACGATGTCAACTCCCTAAAAAACGTCTTCGCCGACTGGATGACTCAGCAGAAATGGAACGACATGATTCAGGTCTTTGAGCTCTGGATCAAGTCTCTGGATAAATATGGAAAGCCTAATCGCCCTGATGTTTTGCTTTATAATCATTATATGAGGGCTTTTTTGATGCTCGGCGCTACGGCGGGGGACCTCCTTGATGTCGTTGCTAGGATGGAGGATTTTGCTATCGAGCCTAATGCTGCGTCATTTAATTTGGTCCTCAAGGCTATGCATAATGCTGGCGAAGCTCAGGCCGCTGAGAAGCTCCTTGAGAGGATGCTGCATTCTGGAAAAGAATCTCAGCCTGATGATGAATCATATAATTTGGTTATTGGCATGCTGTTTCAACAGCAACAGACTGATGCTGCCTTGAAGTATATAGATATAACACTGAAATCTGGTTATATGCTTTCAAAAAAGGTGTTTTATGATTGTGTACAAAGCTGCACTAATACGAGGAGATTGGACAGTTTGGTTTCGGTTATAGAGAGATGCAAGGCTATGGAAAACAATAAAGATCTCTGCCCCAACTGGTTTTTGTGCAACCAACTTGCAAACGTTGCAATACAGAGTGAAAATAGCAAGCTGGCCTTTCTAGCCTTGGAGTTCATGGCAAAATGGATTGCACGAGGGGAGCAAGCGAGGCCCCCTAATTATTACCCTGTTGACGAAGGATTGGTGATCTCTGCTCTTTCCACAGCAGGTCGAACATACAACTCCACTCTTCTGGATGCATCATGGGCCATCTTAAAGAGGTCTCTGCGTGAAAAGAAGCATCCTCAACCTGCAACCTACTTAGCTAAAATATCTGGCCTTGCATCGCTGGGGAACTTGCAGAGGGCTTTTAGTACTTTACATGAACTGGAAAGGGTGCTTGCTAATTCTGCTAATGAATCAGCTGAGGATCTGCTTTGTCCATTTACTTCTCTCTATCAATTGGTTGTGGCCTGTTCCAAGAAAGGTTTCGAAACATTGGATTTGGTTTATTTTCAACTGGAGAATCTGAGTCGTGCAAACCCTCCTTACAAATCTGTTGCTGCCTTAAATTGTATAATTTTGGGCTGTGCGAATATATGGGACCTTGACCGGGCTTACCAAACATTTGAGGCCATTGGTTCCACATTTGGGTTGACTCCCAATATACACTCATACAATGCTTTAATGTGTGCATTTGGAAAACTGAAAAAGACCTTTGAAGCTACTAGGGTATTTGAACATTTATGTAGCCTGGGTGTGAAACCAAATGCGATGTCGTATAATTTACTTGTTGATGCTCATCTCATCAACCGAGATCCAAAGGCTGCCCTTGCTGTAATTGACACGATGTTGGAAGCTGGCTTCGAACCGTCCAAAGAGACATTGTTAAAGGTTAGAAGGCGATGCATTCGGGAGATGGATTATGAAAGCAATGACCGTGTAGAATCCCTTGCTAAGCAGTGCAAAATCTTTTTGGGTACCGAAAATCGAAGGAACATTTTGTTTAATCTGGAGTACAGCACCGAGTACGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_20013.p1 GENE.S_Transcript_20013~~S_Transcript_20013.p1 ORF type:5prime_partial len:600 (+),score=85.46,PPR_2|PF13041.2|0.0037,PPR_2|PF13041.2|5.4e-05,PPR_2|PF13041.2|13,PPR_2|PF13041.2|78,PPR_2|PF13041.2|0.26,PPR_2|PF13041.2|3.9e-09,PPR_2|PF13041.2|0.00018,PPR_3|PF13812.2|82,PPR_3|PF13812.2|54,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|54,PPR_3|PF13812.2|3.3e+03,PPR_3|PF13812.2|7.3e+03,PPR_3|PF13812.2|91,PPR_3|PF13812.2|68,PPR_3|PF13812.2|0.0046,PPR_3|PF13812.2|0.0094,PPR|PF01535.16|0.8,PPR|PF01535.16|79,PPR|PF01535.16|7.3,PPR|PF01535.16|2e+02,PPR|PF01535.16|0.0054,PPR|PF01535.16|0.06,PPR_1|PF12854.3|0.84,PPR_1|PF12854.3|4.6e+02,PPR_1|PF12854.3|92,PPR_1|PF12854.3|7.4e+03,PPR_1|PF12854.3|0.052,PPR_1|PF12854.3|0.69 S_Transcript_20013:2-1801(+)
IKSITTFSFLNQEPQLDEPPTPSPSPSPLPPNPSSGSPLYHQNWRNPNPTTIPISSTTNPQSIVPLGFLNHTAPYQIKALAQSHDVNSLKNVFADWMTQQKWNDMIQVFELWIKSLDKYGKPNRPDVLLYNHYMRAFLMLGATAGDLLDVVARMEDFAIEPNAASFNLVLKAMHNAGEAQAAEKLLERMLHSGKESQPDDESYNLVIGMLFQQQQTDAALKYIDITLKSGYMLSKKVFYDCVQSCTNTRRLDSLVSVIERCKAMENNKDLCPNWFLCNQLANVAIQSENSKLAFLALEFMAKWIARGEQARPPNYYPVDEGLVISALSTAGRTYNSTLLDASWAILKRSLREKKHPQPATYLAKISGLASLGNLQRAFSTLHELERVLANSANESAEDLLCPFTSLYQLVVACSKKGFETLDLVYFQLENLSRANPPYKSVAALNCIILGCANIWDLDRAYQTFEAIGSTFGLTPNIHSYNALMCAFGKLKKTFEATRVFEHLCSLGVKPNAMSYNLLVDAHLINRDPKAALAVIDTMLEAGFEPSKETLLKVRRRCIREMDYESNDRVESLAKQCKIFLGTENRRNILFNLEYSTEYA*

Click here to download the sequence:
Link to NCBI Protein BLAST