Transcript Information: S_Transcript_20016.p1


Annotated TAIR IDAT5G11380.1
Annotated Gene Name1-deoxy-D-xylulose 5-phosphate synthase 3
Annotated Gene Symbol(s)DXPS3
Annotation TypeOrtholog
Chromosome Positionchr5:3630172-3633250 | Forward length=700
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.313343372948
Replicate 231.596848202867
Replicate 333.564757913921
Condition 2: 8 Hour
Replicate 111.932766881055
Replicate 211.216910259808
Replicate 311.307437164415
Condition 3: 24 Hour
Replicate 128.834035964732
Replicate 227.529311291491
Replicate 329.134605310065


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_20016.p1 GENE.S_Transcript_20016~~S_Transcript_20016.p1 ORF type:complete len:722 (+),score=140.66,DXP_synthase_N|PF13292.2|8.3e-85,Transketolase_C|PF02780.16|4.8e-30,Transket_pyr|PF02779.20|7.3e-28 S_Transcript_20016:195-2360(+)
ATGGGTATTGCTTATCTTGAATACCCAATTGGAATGAATGCTCAATTCAATGGAAAGTGTAGAGCTTCTGTCCATAAACATGAATTCACAACCTTCAGTTGCCAACCCAATTGTGAATTCTCCAGAATTAAAGAGTGCCCATCAGTTGTGTCTAGCCCTTTGTCTAAGAGATATGCTGGAAGAATTCAAGCTCTTTCCGACAACAATGAATTTTTCTGGGAAGAAATATCTACGCCTGTACTTGATATGGTTGATAATCCCATTAACTTGAAAAATCTGTCGCCTAAGGAGTTAAAACAATTAGCTTATGAAATCCGTGGAGAGCTCGCTCTCATGTTATCAAAAGGAGAGCAAGCTCTGAAAGCTAGTTTATCTGTTGTGGAGCTGACTGTTGCAATTCACTATGTCTTTCATGCACCGATGGACAAAATATTGTGGGATATGGGGGATCAAACATATGCTCATAAATTACTCACAGGAAGGAGATCCCTTATTGCTACACTCAGGAAAAAGAATGGACTTTCTGGTTATACCTGCCGGACTGAGAGTGAATTTGATCCATTTGGTGCAGCTCATGGGTGCAACAGTATCTCTGCTGGACTGGGTTTGGCTGTTGCAAGGGATATTAAAGGGAAAAGAGAGCGTGTAGTTTCAGTTATCAGTAATGAAACAACTACTGCTGGTCAGGTCTACGAGGCTATGAGTAATGCTGGTTATTTGGACTCCAACTTGGTGGTGATCTTAAATGACAGTCGTCATTCTTTACATCCTAAGCCTGACGAGGACTTCAAGACACCCATCAATGCACTTTCTAGCAGTTGGAGCAAAGTTCAATCCAGTAAATCTTTCCGAAAACTCAGAGAAGTTGCTAAGGGTCTTACTAAGAGGATTGGCAAGGGTTTATATGAATGGGCTGCCAAAGTCGATGAGTACGCACGTGGTATGCTGGGTCCTACAGGATCTACTCTTTTTGAAGAGCTAGGACTGTATTACATTGGTCCTGTAGATGGACACAACATTGATGACCTTATCTGTGTACTGCAAGAAGTTGCATCCCTAGATTCTATGGGCCCTGTGCTGGTCCATGTCTTGACAGATGACAGTATTGGGCAAAAAGGAAAGAAAAATATCCAGACAGCGGAAAATCTTGGTGGAGCAGACTCATATCAGGAAGATTTGTTGCTAGCTAGGACTGGTCCACAAACATATAGTGATTACTTCATAGAGACTTTATCTATGGAGGCTGAGAAGGATAAGGATATCATTGCAGTTCATGCAGGAATGAAAATGGAGAAATCATTTGAGTTGTTCCAAGAGAATTTTCCAGATAGGTTTTTTGATGTGGGGATGGCTGAGCAACATGCAGTTACATTTTCGGCTGGTCTAGCCTGTGGCGGACTCAAACCATTTTGCATCATTCCATCTTCCTTTCTGCAGCGAGCTTATGATCAGATTGTTCATGATGTAGATCGACAGAAAATTCCAGTGCGTTTTGCCATTACAAATGCAGGATTGGTAGGGGCTGATGGACCAGTGTGTTCTGGACCGTTTGACATAACTTTTATGTCTTGCTTGCCGAACATGATTGTCATGGCACCCTCCGATGAGTTTGAACTTGCCCGCATGGTCGTCACGGCAGCTCAAATTGATGACCAACCAGTATGCTTCAGGTATCCTAGTGGTGCTGTTGTTGGCATAAATGAGTCCATGGACTGTGGAACACCTCTTGAGATAGGCAAGGGAAGAATTCTGTTCGAAGGAAAAGACGTTGCTTTGCTAGGATATGGTGCCATGGTCCAGAACTGTGTCTCGGCTCGGTCCCTTCTTTCGAAACTTGGAGTGGAAGTTACTGTTGCCGATGCAAGATTCTGCAAGCCCCTTGACATTGAGCTTGTAAGAAATCTTTGTGAAAATCATGCCTTTTTAATTACTGTTGAGGAAGGATCCATGGGAGGATTTGGGTCCCATGTCGCCCAATTCATCGCCCTCGATGGAAAGCTTGATGGAAGAGTCAAGTGGAGACCAATTGTTTTGCCAGATACCTACATCGAGCACGCTTCTCCAAAAGAACAGCTGACTCGTGCAGGGCTGACCAGCCATCATATTGCTGCTACTGCATTATCATTACTAGGTCGGACTCGAGAAGCCCTCTTGTTGATGTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_20016.p1 GENE.S_Transcript_20016~~S_Transcript_20016.p1 ORF type:complete len:722 (+),score=140.66,DXP_synthase_N|PF13292.2|8.3e-85,Transketolase_C|PF02780.16|4.8e-30,Transket_pyr|PF02779.20|7.3e-28 S_Transcript_20016:195-2360(+)
MGIAYLEYPIGMNAQFNGKCRASVHKHEFTTFSCQPNCEFSRIKECPSVVSSPLSKRYAGRIQALSDNNEFFWEEISTPVLDMVDNPINLKNLSPKELKQLAYEIRGELALMLSKGEQALKASLSVVELTVAIHYVFHAPMDKILWDMGDQTYAHKLLTGRRSLIATLRKKNGLSGYTCRTESEFDPFGAAHGCNSISAGLGLAVARDIKGKRERVVSVISNETTTAGQVYEAMSNAGYLDSNLVVILNDSRHSLHPKPDEDFKTPINALSSSWSKVQSSKSFRKLREVAKGLTKRIGKGLYEWAAKVDEYARGMLGPTGSTLFEELGLYYIGPVDGHNIDDLICVLQEVASLDSMGPVLVHVLTDDSIGQKGKKNIQTAENLGGADSYQEDLLLARTGPQTYSDYFIETLSMEAEKDKDIIAVHAGMKMEKSFELFQENFPDRFFDVGMAEQHAVTFSAGLACGGLKPFCIIPSSFLQRAYDQIVHDVDRQKIPVRFAITNAGLVGADGPVCSGPFDITFMSCLPNMIVMAPSDEFELARMVVTAAQIDDQPVCFRYPSGAVVGINESMDCGTPLEIGKGRILFEGKDVALLGYGAMVQNCVSARSLLSKLGVEVTVADARFCKPLDIELVRNLCENHAFLITVEEGSMGGFGSHVAQFIALDGKLDGRVKWRPIVLPDTYIEHASPKEQLTRAGLTSHHIAATALSLLGRTREALLLMC*

Click here to download the sequence:
Link to NCBI Protein BLAST