Transcript Information: S_Transcript_200544.p1


Annotated TAIR IDAT5G61220.1
Annotated Gene NameLYR family of Fe/S cluster biogenesis protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24626057-24626320 | Reverse length=87
E-Value4.1E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 137.52624634601
Replicate 229.840319689301
Replicate 334.231841076036
Condition 2: 8 Hour
Replicate 128.229293657212
Replicate 231.384967516163
Replicate 327.449904469724
Condition 3: 24 Hour
Replicate 127.816866027591
Replicate 232.44675182513
Replicate 332.661640236841


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_200544.p1 GENE.S_Transcript_200544~~S_Transcript_200544.p1 ORF type:5prime_partial len:139 (+),score=5.67,Complex1_LYR_1|PF13232.2|3.4e-18,Complex1_LYR|PF05347.11|1.7e-16 S_Transcript_200544:2-418(+)
TTTGAACCGACCATTACTTTGATTTTGGAGCGTTGCCCTTGCCCTTTGCAAGTTCCTACTTTCCAACCTCTCATTTACATTACATCCCAAACAATCCCAACATTCTGGAATACCCCTCTTTCTCTCTCCTCTCCGATGAGCATGACAGCGGCACCGTCAAGAGCAGAGATACTCTCCATCTTCCGAGCACTTCTCCGAGTAGCTCGTAAATTCCCTGACTACAACATTCGCGAGTACACCAAACGCCGAACAATTGACGGCTTTCGTCACAACAAAACCCTCTCAGACCCTTCTAGTATCGCTAACGCTGTTTCCGATGCTAAGTCTCAGCTACAAATTGCCAATCGCCAGGCTATCGTTTATTCCCTTTATGCCCCCAAAGTCAAGAGCATCATGGAGTTCCACAACTCCAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_200544.p1 GENE.S_Transcript_200544~~S_Transcript_200544.p1 ORF type:5prime_partial len:139 (+),score=5.67,Complex1_LYR_1|PF13232.2|3.4e-18,Complex1_LYR|PF05347.11|1.7e-16 S_Transcript_200544:2-418(+)
FEPTITLILERCPCPLQVPTFQPLIYITSQTIPTFWNTPLSLSSPMSMTAAPSRAEILSIFRALLRVARKFPDYNIREYTKRRTIDGFRHNKTLSDPSSIANAVSDAKSQLQIANRQAIVYSLYAPKVKSIMEFHNSN*

Click here to download the sequence:
Link to NCBI Protein BLAST