Transcript Information: S_Transcript_20064.p1


Annotated TAIR IDAT1G63490.1
Annotated Gene Nametranscription factor jumonji (jmjC) domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:23544938-23551946 | Reverse length=1116
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.6674214369466
Replicate 28.0499367304446
Replicate 37.5964134571371
Condition 2: 8 Hour
Replicate 112.530107716067
Replicate 212.540328129404
Replicate 312.029051297081
Condition 3: 24 Hour
Replicate 19.2102752014397
Replicate 28.4039863466888
Replicate 37.4030108713395


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_20064.p1 GENE.S_Transcript_20064~~S_Transcript_20064.p1 ORF type:complete len:1850 (+),score=374.11,PLU-1|PF08429.7|3.3e-14,PLU-1|PF08429.7|1.7e-14,PLU-1|PF08429.7|3e-15,PLU-1|PF08429.7|3.2e+02,PLU-1|PF08429.7|0.0027,JmjC|PF02373.18|1.1e-41,PHD|PF00628.25|3.3e-09,PHD|PF00628.25|1.6e+03,PHD|PF00628.25|3e-05,PHD|PF00628.25|2.2e-08,zf-C5HC2|PF02928.12|1.6e+04,zf-C5HC2|PF02928.12|7.5e-15,zf-C5HC2|PF02928.12|1.6e+04,JmjN|PF02375.13|1.8e-14,ARID|PF01388.17|5.7e-11 S_Transcript_20064:227-5776(+)
ATGATGGGGAAAGGTAGACCTAGGGCAGTTGAAAGAGGGGGAGGGTTAGGGCAAACTTCAAATTTATTATCAAATGGTTCTTTAAATATACCACCAGCACCTGTTTATTATCCATCTGATGAAGAATTTAAGGATCCTTTGGAGTTTATTTACAAGATTAGGGAAGAAGCTGAGCCTTATGGGATTTGTAAGATTGTACCGCCTAAGAGTTGGAAAGCACCTTTTGCTTTGGATTTGAATAGATTTAGTTTCCCTACCAAGACTCAGGCAATTCATCAGTTGCAAGCTAGGCCCGCGTCGTGCGACTCGAAGACGTTCGAGTTGGAGTACAAGAGTTTTTTGGAGGGGCATTGCGGGCGGAAATCGAGGAGGAAGGTTATTTTCGAGGGGGAGGAGTTGGATTTGTGTAAGTTGTTTAATGCGGCGAAGCGGTTTGGGGGGTATGATAAGGTCACCAAGGAGAAGAAGTGGGGAGAGGTTTTTAGGTTTGTTAGGCCAGGGAGTAAAATTTCAGAATGTGCTAAGCATGTTTTAAGCCAATTGTATAGCGAACATTTGTATGATTATGAGGAGTATTATCATAAGTTGAATAAGGGGAAATATAAGGGTTGTAGGAGAGGGATACGGAATGAGAGGAAGAGTGATCAGAAGTTGGATTTTTGCAGCTCTAAGAAGAGGCTGAAGAATAATAGTGGGGAGGCTGTTAAAGTTTCCGTTCCTGAGAAGGAAGAGGAGCGCGATCAGATATGTGAACAATGTCATAGTGGGTTGCATGGTGAAGTTATGTTGTTGTGTGATAGATGTAATAAAGGATGGCATATATATTGCCTGTCACCTCCTTTGGATGCTATCCCTCCAGGAAATTGGTACTGTCTTGAGTGCCTTAATTCTGACAAAGATTGCTTTGGGTTTGTCCCTGGGAAATGCTTTTCTTTGGAAGCTTTTAGAAAGATGGCTGATCGGACCAAGAAGAAATGGTTTGGCTCTGCATCTTGCTCCCGTGTCCAGCTAGAAAAGAAATTTTGGGAAATTGTGGAAGGATCATTGGGTGAAGTTGAAGTCATGTACGGTAGTGATTTGGATACGTCTGTGTATGGAAGTGGTTTTCCTCGCCCAAATGACCAAAGACTGGAGTCCATTGATGCTGAATTGTGGAATGAATATTGTAACAGTCCCTGGAATCTGAATAACTTGCCGAAGTTGAGGGGCTCAATGCTTCGAGCAGTTCATCACAGTATTGCTGGTGTTATGGTGCCCTGGTTATATATAGGCATGCTCTTCTCTGCTTTCTGTTGGCATTTTGAAGATCATTGCTTCTATTCAATGAATTACCATCACTGGGGAGAGCCAAAATGTTGGTATAGTGTTCCAGGCAGTGAAGCCTCAGCATTTGAGAAGGTCATGCGCAGCTGCCTTCCTGATCTCTTTGATGCCCAACCAGATTTGCTATTCCAGCTTGTTACAATGTTGAATCCCTCTGTTCTACAGGAAAACGGTGTTCCAGTTTACACTGTTCTGCAGGAGCCGGGAAATTTCGTGATTACTTTTCCTAGATCATATCATGGAGGTTTCAACTTTGGGTTGAACTGTGCTGAAGCTGTTAATTTTGCTCCTGCTGATTGGTTACCTCATGGAGGGTTTGGATCGGAGCTCTATCAACTGTATCATAAGCCTGCTGTGCTTTCTCATGAAGAGCTGCTTTGTGTGGTGGCCAAGATCGGTTGTGACACCAAGGTTGCACCCTACATGAATAAAGAGTTGCTGAGAGTATTTTCTAAAGAAAAGAGTTGGAGAGAGCGACTCTGGAAGAAGGGCATCGTCAAAACATCTGTTATGTCACCCCGGAAACATCCTGACTATGTCGGTACTGAGGAGGATCCTACTTGCATTATATGCCAGCAGTATCTGTATCTTTCAGCAGTTGTTTGTCGGTGCCGACAATCTACTTTTGTGTGTTTGGAGCATTGGGAACGCCTTTGTGAATGCACTCCAAGAAAACGACGTCTCCTTTATCGTCATTCTCTTGCTGAATTATATGAGCTGATAGTGATGACAGAAAATGTTATTTCTGGCTGTAGTAACACTACACGACGGAGGGGTTTGCCAAGGCAGAATGTGTGCTCCACAGACTCCAGTGCTTTGACCAAAAAGGTGAAGGGGAAACAATATACTCTTGCTCAGCTTGCTGAAGAGTGGCTCTTGAACTCATGTAAGATATTTCAGCTGCCTTTCTCCTCGAGTGCGTATGCTAATGCATTGAAGGAAGCACGTCAATTCCTCTGGGCAGGTCCGGAAATGGATCCGGTGAGGGATGTGTTTAAGAATTTGGTTCAAGCAAAGGAATGGGCAGAGAGCTTAAGACACTGTCTTTCAGTTGCTGAATGTTGGTCAAGTAGTGGTTCATTGGAGAAAATAAGCTTTGAACATATTGACAACTTGTTGAAACATGATCCTGTGCCATGCAATGAGCCAGGACATGCTAAATTGAAGGATTATGCTGAAGCGGCAAGGTTGTTGATTCAGGAAATTAATGATTTTCTGTCCAACTCTACATTTTCTATGGCCGAGTTGGAGAATTTGCATTCCCGAGCTTCCAACTTTCCAATCCAATGTAAAGAAAGCGAAAATTTGGCGAAAAAGATGTCATCTGTCAAGATGTGGCTTGATAATGTAAGAAAATGCATTGTAGAGACTTGTCCAGCTGCAATTGAGAAGGATTTCCTTTGCCATCTGAAATCAGAGATGTTGGAGCTTCAGTTACATGTGCCAGAGAATGAAATGCTTCTTGGGCTAATCAGGCAAGCTGAACTGTGCCAAGCTCAGTGTAATGAAATGCTGAAAGGTCCTATTACTCTGAAGGAACTTGAGTTGCTTATTAAGGAATTTGATGCTTTAGTAGTCAACGTTCCAGAGTTAAAACTACTACAACAATACCACAGTGATACTGTAATGTGGATCTCCCGTTTCAATAATTTACTATTGAATATTCATGAACGGGATGATCAGGAGAATGTCATGGATGAATTAAAATGCATCCAGAAAGATGGTTCATTATTAAGAGTTCAAGTTAATGAGTTGGCTCTCATTGAGGCTGAATTGAGCAAGGCATGCTGCAGAAAGGATGCACTGAAGGCACGTAGAATTAAAATGACTACAGACTTTGTCCAGAAAGTGCTGTCGGAGGCTGCTGTATTACAGATCGATGAGGAAGAATGCTTTGTTTGGCTTTCCAAAATGCTCACAACTGCCATGTCTTGGGAAGAAAGAGCTGTGCAGATTCTGGCAGTTGAGTCAAAGTTGGAGGACTTTGAGGATGCTATAAGGACCTCTGAGGACATATATTTGATCTTGCCTTCCCTTCCTGCTGTCAAGGATGCAGTATCAGCAGCAAAATCTTGGCTAGAAAGTTCAAAGTGTTTTCTAGAGCCTTCTTGTCTCACTGCATCTGCTTTGGCGTTTGAGGACTTGAGGGAGCAAGTTTCTCAGTCAAGGCTTCTTAAAATATCATTAGTGGAGCAAAGGATGGTTGAGACTCTTATGAGGAAATGTGAAGAGTGGAGATGCTGTGCTTGTTCTTCTCTAAGGGATATAGAAGAAATGATGAATAGGAAAGATGTTTTTAATATGTCGACTAGTATTGTCATTTTGGACATTGATCAATTAAGAACCAAGGCTGATAATGTTGCTGCTGCTGGTATCTCCTTGGGGTTTGACTTCCCCGAACTCTCCAGTCTCCAAGATGCCTCGTCGACATTAAGTTGGTGCTCTAGGGTCCTTTCGTTTTGCTCAGAAATCCCTTCAGTTGAGGATGTTATCACTTTGATTGAAGTGATGAAAAACCTTCAAAGTGGGTATGCCAGTAGTTTTTTGTATACCTCCTTAATCAATGGAGTTTCCTGGCTGAAGAGGGCCACAGAAGTTCTACCTATGTCAAGACGACTGCATGTAACTGATGCTGAAGATATTCTGAAGGAATCCCAGAGTCTGGTGGTCTCGTTTTCTGCATCAATTACACAACTTCGGGAAGCAATTGAGAAACACAAGTCTTGGCAAGAAAAAGCACAAACTTTCTTCGGTGTTGATTCTAGTGAGCGCTCCTGGTCCGTTTTGTCGCTACTGAAGGAACTTGGAGAGAAGGTGTTCAATTGCCCAGAATTGGACATAGTGATGTCTGAGTTTGAGACTGTAGAAAACTGGAAGCAACGAGGCAAGGAACTTGTTGGGTGTTCGTCTGGGGATGTGACTAGTTTGTCAAACTCCCTACTGAAGATCAAACAGTCATTGCATAGATCTTTGTATATATATGAGAAGTCCAAATGCTGGAAAGTGAGATATTTTTGCATTGGATGCTCCAGCAACACTGAGGATCAAGAGTTTATAACTTGTTCATCATGTAAGGACTGTTACCATCGTAGATGCTTGGTGCCGAAATCGTTTGACATTAGCAACGTGAGAGAATATAAGTGCCCATATTGTGCGTTAGTGGACAGCGGCTCAATCTCTCGGAGTAAAGACAGTCCTCTGAAATATAAAGGGAAGCGTCCTGAGCTGGAGAAGCTTGTTGATTTGTCTTCTGATGCTAAGAAGTTTACCATAAGATTGGACGAGAAAGATATATTGTTAGAGATTGTTGATCAAGCTATTGCTTGTAGAGATTGCTTGTCAGAAATTGTTGATTCTTCATTATCCTCTTTTGAGAAAGATGTCTCATCCATCTCTAGGAAACTGACCATTGCTTTGAAGGCTCTAGATGTGGCAGGGGTGTATGATTCACATGCCAGCCACAGGTTTGATCTTGCACTGGCCAGAAATTCGTGGCGAATCAGAGCTAGTAAACTAGTTGAGGGTTCACAAAAGCCTGTAATCCAACAGGTGCAACGCCATTTGAAAGAGGGCTCGGCTATAAATGTGCCTTCACAAGATTTCTTCAAACAAAAGCTTGTAGAGGTGAAGCAGGCTGGAATGCAGTGGGCAGAGATGGCCAAGAAGGTTGCAGGTGATAAGGGAAATCTCGAGTTGGATAAAGTTTTTGCCCTCATTACAGAGGGTGAGAATTTGTCAGTCCACTTCGAGAAGGAGCTCAAGCTATTACGAGATCGAAGTGTGCTTTACTGTATTTGTCGAAAGCCTTATGATCAGAGACCGATGATTGCTTGCGATCAGTGTGATGAGTGGTACCATTTTGATTGTGTCAATTTGGTTTCACCGCCAAAGATCTACATTTGTCCTGCTTGTAATCCTCCAGTAGAAGGGAAGGCTCTTTTCTGTACGTCTGTTAAGCAAGACAGTCATTCGCGCAAATCTTCAAGTGTAAAAGACAGTGAACCACAAACACCTTCTCCTCGACATGGAAAATCACGTTGGAAGCCTCGGAAGCCAAAATCATGCACGAAGCAGAAGAAGTTGACAGTTGCAAACAGTAGCATTAGTTTGCTATTGCCTAGTGGTCTTGATCGATTGTTGTGGAGAAATAGGAAACCTTTGAAAAGATTGACAAAGAAAAGGACTGAGCTAGGAAACCTCACCGCATTAATTCATTTAGAGCAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_20064.p1 GENE.S_Transcript_20064~~S_Transcript_20064.p1 ORF type:complete len:1850 (+),score=374.11,PLU-1|PF08429.7|3.3e-14,PLU-1|PF08429.7|1.7e-14,PLU-1|PF08429.7|3e-15,PLU-1|PF08429.7|3.2e+02,PLU-1|PF08429.7|0.0027,JmjC|PF02373.18|1.1e-41,PHD|PF00628.25|3.3e-09,PHD|PF00628.25|1.6e+03,PHD|PF00628.25|3e-05,PHD|PF00628.25|2.2e-08,zf-C5HC2|PF02928.12|1.6e+04,zf-C5HC2|PF02928.12|7.5e-15,zf-C5HC2|PF02928.12|1.6e+04,JmjN|PF02375.13|1.8e-14,ARID|PF01388.17|5.7e-11 S_Transcript_20064:227-5776(+)
MMGKGRPRAVERGGGLGQTSNLLSNGSLNIPPAPVYYPSDEEFKDPLEFIYKIREEAEPYGICKIVPPKSWKAPFALDLNRFSFPTKTQAIHQLQARPASCDSKTFELEYKSFLEGHCGRKSRRKVIFEGEELDLCKLFNAAKRFGGYDKVTKEKKWGEVFRFVRPGSKISECAKHVLSQLYSEHLYDYEEYYHKLNKGKYKGCRRGIRNERKSDQKLDFCSSKKRLKNNSGEAVKVSVPEKEEERDQICEQCHSGLHGEVMLLCDRCNKGWHIYCLSPPLDAIPPGNWYCLECLNSDKDCFGFVPGKCFSLEAFRKMADRTKKKWFGSASCSRVQLEKKFWEIVEGSLGEVEVMYGSDLDTSVYGSGFPRPNDQRLESIDAELWNEYCNSPWNLNNLPKLRGSMLRAVHHSIAGVMVPWLYIGMLFSAFCWHFEDHCFYSMNYHHWGEPKCWYSVPGSEASAFEKVMRSCLPDLFDAQPDLLFQLVTMLNPSVLQENGVPVYTVLQEPGNFVITFPRSYHGGFNFGLNCAEAVNFAPADWLPHGGFGSELYQLYHKPAVLSHEELLCVVAKIGCDTKVAPYMNKELLRVFSKEKSWRERLWKKGIVKTSVMSPRKHPDYVGTEEDPTCIICQQYLYLSAVVCRCRQSTFVCLEHWERLCECTPRKRRLLYRHSLAELYELIVMTENVISGCSNTTRRRGLPRQNVCSTDSSALTKKVKGKQYTLAQLAEEWLLNSCKIFQLPFSSSAYANALKEARQFLWAGPEMDPVRDVFKNLVQAKEWAESLRHCLSVAECWSSSGSLEKISFEHIDNLLKHDPVPCNEPGHAKLKDYAEAARLLIQEINDFLSNSTFSMAELENLHSRASNFPIQCKESENLAKKMSSVKMWLDNVRKCIVETCPAAIEKDFLCHLKSEMLELQLHVPENEMLLGLIRQAELCQAQCNEMLKGPITLKELELLIKEFDALVVNVPELKLLQQYHSDTVMWISRFNNLLLNIHERDDQENVMDELKCIQKDGSLLRVQVNELALIEAELSKACCRKDALKARRIKMTTDFVQKVLSEAAVLQIDEEECFVWLSKMLTTAMSWEERAVQILAVESKLEDFEDAIRTSEDIYLILPSLPAVKDAVSAAKSWLESSKCFLEPSCLTASALAFEDLREQVSQSRLLKISLVEQRMVETLMRKCEEWRCCACSSLRDIEEMMNRKDVFNMSTSIVILDIDQLRTKADNVAAAGISLGFDFPELSSLQDASSTLSWCSRVLSFCSEIPSVEDVITLIEVMKNLQSGYASSFLYTSLINGVSWLKRATEVLPMSRRLHVTDAEDILKESQSLVVSFSASITQLREAIEKHKSWQEKAQTFFGVDSSERSWSVLSLLKELGEKVFNCPELDIVMSEFETVENWKQRGKELVGCSSGDVTSLSNSLLKIKQSLHRSLYIYEKSKCWKVRYFCIGCSSNTEDQEFITCSSCKDCYHRRCLVPKSFDISNVREYKCPYCALVDSGSISRSKDSPLKYKGKRPELEKLVDLSSDAKKFTIRLDEKDILLEIVDQAIACRDCLSEIVDSSLSSFEKDVSSISRKLTIALKALDVAGVYDSHASHRFDLALARNSWRIRASKLVEGSQKPVIQQVQRHLKEGSAINVPSQDFFKQKLVEVKQAGMQWAEMAKKVAGDKGNLELDKVFALITEGENLSVHFEKELKLLRDRSVLYCICRKPYDQRPMIACDQCDEWYHFDCVNLVSPPKIYICPACNPPVEGKALFCTSVKQDSHSRKSSSVKDSEPQTPSPRHGKSRWKPRKPKSCTKQKKLTVANSSISLLLPSGLDRLLWRNRKPLKRLTKKRTELGNLTALIHLEQ*

Click here to download the sequence:
Link to NCBI Protein BLAST