Transcript Information: S_Transcript_200660.p1


Annotated TAIR IDAT3G12010.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: sperm cell, cultured cell; CONTAINS InterPro DOMAIN/s: Colon cancer-associated Mic1-like (InterPro:IPR009755); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:3821337-3825537 | Forward length=682
E-Value6E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.1886157646709
Replicate 23.9599878692975
Replicate 35.5170578027865
Condition 2: 8 Hour
Replicate 16.379390265809
Replicate 26.5012209722282
Replicate 35.2834152183287
Condition 3: 24 Hour
Replicate 15.0411269593679
Replicate 26.1986493200266
Replicate 36.0360448148996


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_200660.p1 GENE.S_Transcript_200660~~S_Transcript_200660.p1 ORF type:internal len:117 (-),score=28.40,Mic1|PF07035.8|1.2e-16 S_Transcript_200660:2-349(-)
CCTGGTGGTGTACCTTTGGATGTTAATAATGCAGAGCAGAATGAATCTCAGATCACAACTGCAGCCATTTCACCCAATGAGGTTTACCGCTATGTGTTTGCCCCAGTGGATGAAGAGATGGCTGGAGACCTTGCTTATTTGGTTGCTGTCATCGTTGAGTTCCTTCGCAGTGCTAATCTTGAGAGAATCAGGATGTATCCTAACCTCTATGTTATGATGGTGCAATTGTTGGCACGTAGCGAAAGATATGCAGAACTGAACTTGTTCATCATCGATAAGATTATCGAACCCTCCAAAGAAGTTGCATTTGAGCTACTAGAATCCGGTTGCCAGCATCTGCCAACCAGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_200660.p1 GENE.S_Transcript_200660~~S_Transcript_200660.p1 ORF type:internal len:117 (-),score=28.40,Mic1|PF07035.8|1.2e-16 S_Transcript_200660:2-349(-)
PGGVPLDVNNAEQNESQITTAAISPNEVYRYVFAPVDEEMAGDLAYLVAVIVEFLRSANLERIRMYPNLYVMMVQLLARSERYAELNLFIIDKIIEPSKEVAFELLESGCQHLPTR

Click here to download the sequence:
Link to NCBI Protein BLAST