Transcript Information: S_Transcript_200877.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value2E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0817486557025
Replicate 24.6020542635307
Replicate 33.9600967050676
Condition 2: 8 Hour
Replicate 16.8031920030118
Replicate 27.4115326781916
Replicate 37.3232359869875
Condition 3: 24 Hour
Replicate 16.7008845063172
Replicate 24.3102954531704
Replicate 36.3441952184648


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_200877.p1 GENE.S_Transcript_200877~~S_Transcript_200877.p1 ORF type:internal len:163 (+),score=12.95 S_Transcript_200877:3-488(+)
GGGGTTCAACGTTGGCCTGTTACTTATTTAGGCCTCCCTTTGGGGGGTAATCCTAGGGCAGCGTCTTTTTGGGATCCCGTGGTGTCTAGAGTTGCCAAGCGACTGGATGGTTGGAAGGGGAGATACTTTTCGCTGGGCGGTCGCATAGCGCTTATTCATTCTTGCCTTGCTAGCATTCCTCTTTATTTTCTTTCTTTATTTAAGGTGCCAGTGGGTATAGCTAATAAGATTGAGAAGGTCATGCGTGACTTCCTTTGGTCTGGGACTAGGGGCGAGAAGGGTGTGCACCTTGTTAAATGGGACCTAGTGTGTCGACCTAAGGAGGAGGGCGGCCTCGGTTTCGGCAGGTTGGTGTCCAAGAACATTTCTTTGGTAGGGAAGTGGTTGTGGAGGTTTCCCCTGGAACGTGATTCTCTTTGGCACAGTGTCATCCGGAGCAAATACGGGCTTCTTCAGAATGGGTGGGACGCCTTGGCTTCTAATGTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_200877.p1 GENE.S_Transcript_200877~~S_Transcript_200877.p1 ORF type:internal len:163 (+),score=12.95 S_Transcript_200877:3-488(+)
GVQRWPVTYLGLPLGGNPRAASFWDPVVSRVAKRLDGWKGRYFSLGGRIALIHSCLASIPLYFLSLFKVPVGIANKIEKVMRDFLWSGTRGEKGVHLVKWDLVCRPKEEGGLGFGRLVSKNISLVGKWLWRFPLERDSLWHSVIRSKYGLLQNGWDALASNV

Click here to download the sequence:
Link to NCBI Protein BLAST