Transcript Information: S_Transcript_201031.p1


Annotated TAIR IDAT1G16830.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:5760793-5762619 | Forward length=608
E-Value3E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.31682144327596
Replicate 20.26265225663708
Replicate 30.21955638194763
Condition 2: 8 Hour
Replicate 10.25387369425158
Replicate 20.26633153142532
Replicate 30.50752018107098
Condition 3: 24 Hour
Replicate 10
Replicate 20.2698072806708
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_201031.p1 GENE.S_Transcript_201031~~S_Transcript_201031.p1 ORF type:internal len:84 (+),score=18.40,PPR_2|PF13041.2|7.6e-13,PPR_2|PF13041.2|2.9e-05,PPR|PF01535.16|0.0011,PPR|PF01535.16|2.2e-05,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|0.00042 S_Transcript_201031:3-251(+)
AAGCAGGTTTTGGCCAAGAATTACTCTTTGGATGTTGTATTATGCACAGTTGGCATTGAGGGACTTGTTAGAGGAAACATGGTCGGTGAAGCGTTGACTTTGTACAATAAGATGAAGGAACTTGGGGTTAGTCCTAATGCACGTATTTACAACCTTATGCTTTCTGGTCTTTGCAAGGAAAGAGATGACAATATGGTTAAAATGATTCTACAGGAAATGCATGATAAAGGAGTTAAACTAGAGTATAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_201031.p1 GENE.S_Transcript_201031~~S_Transcript_201031.p1 ORF type:internal len:84 (+),score=18.40,PPR_2|PF13041.2|7.6e-13,PPR_2|PF13041.2|2.9e-05,PPR|PF01535.16|0.0011,PPR|PF01535.16|2.2e-05,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|0.00042 S_Transcript_201031:3-251(+)
KQVLAKNYSLDVVLCTVGIEGLVRGNMVGEALTLYNKMKELGVSPNARIYNLMLSGLCKERDDNMVKMILQEMHDKGVKLEYK

Click here to download the sequence:
Link to NCBI Protein BLAST