Transcript Information: S_Transcript_201178.p1


Annotated TAIR IDAT1G19715.3
Annotated Gene NameMannose-binding lectin superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:6816934-6819432 | Reverse length=601
E-Value2E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.085298080881989
Replicate 20.2121422072838
Replicate 30.059111333601284
Condition 2: 8 Hour
Replicate 10.27340243996324
Replicate 20.35852321538023
Replicate 30.06832002437494
Condition 3: 24 Hour
Replicate 10
Replicate 20.14528084343812
Replicate 30.40419942956917


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_201178.p1 GENE.S_Transcript_201178~~S_Transcript_201178.p1 ORF type:5prime_partial len:312 (+),score=29.41,Jacalin|PF01419.13|2.2e-10,Jacalin|PF01419.13|4.6e-12 S_Transcript_201178:1-936(+)
GAATTCAAATTATACGGACCATGGGGCAATAAGAAAACGCCAAATTGGGACTTGAAGCTGGCTCCCGGTGAAAGTATCAGGGAAATACACATTTCGTGCGGATGGATAGTTGATAGAATTGATTTCTTCATAGAGGATAGTAATGGAGGGACGTCAACCAAAGGTTTTGGAGGCAAAGGTGGAGGTATTAAAAAAATCCATCTGGGTCCAAATGAACAGATAACAAAAATAAGCGGGATATCTGGAGTGTATGGGGACGATAGTGACCGTCATATCATAGAAATTATCATACACACAAACTTGAATGAGCATGGACCTTTTGGGATGGCACTAGGCTGTTTAAACCACCAAGACTTTTCATTTTCTTTACCACCAGGTTCTTCTGTTGCTGGATTTTGTGGAAGAGCTGGTCGTTTCTTTGATTCTATTGGAATTTACCTTCGAATGGAATTGGAAAAACATGGACCGTGGGGCAGTCCAGATGCAGCAATTAATTGTGAGCTGAAGCTTGCTCCTCATGAAATAATTAGTAATGTGCGCATTCGACATGGAACCATCATCGAAAGAATTGATTTCGACATAGAGGATACTCATGCAAGAACGACTAGAACCACAGGATTGGGAAGCAGTGAGCCTCGGGAAACATTTGAGGATACTTCTATCCCACTGGCTCCAAATGAACGAATAACAAATATAAGCGGGGAATATGGAGTCTATAGTACAATCAGTGATACTCAAGGGCATGTCATCGCAGAAATTAGCATATACACAAATTTACATCCGGATGGTTATGGACCATTTGGGAAGGCAGAGACTTGTACTGACAGACATCAGTTTTCAAGCTCAGTACCTCCAGATTCTTCTATTGTTGGATTTTTTGGAAGATATGGTCAATTTATTGATTCAATCGGAGTTTACGTTCGAAAGGTAAGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_201178.p1 GENE.S_Transcript_201178~~S_Transcript_201178.p1 ORF type:5prime_partial len:312 (+),score=29.41,Jacalin|PF01419.13|2.2e-10,Jacalin|PF01419.13|4.6e-12 S_Transcript_201178:1-936(+)
EFKLYGPWGNKKTPNWDLKLAPGESIREIHISCGWIVDRIDFFIEDSNGGTSTKGFGGKGGGIKKIHLGPNEQITKISGISGVYGDDSDRHIIEIIIHTNLNEHGPFGMALGCLNHQDFSFSLPPGSSVAGFCGRAGRFFDSIGIYLRMELEKHGPWGSPDAAINCELKLAPHEIISNVRIRHGTIIERIDFDIEDTHARTTRTTGLGSSEPRETFEDTSIPLAPNERITNISGEYGVYSTISDTQGHVIAEISIYTNLHPDGYGPFGKAETCTDRHQFSSSVPPDSSIVGFFGRYGQFIDSIGVYVRKVS*

Click here to download the sequence:
Link to NCBI Protein BLAST