Transcript Information: S_Transcript_201239.p1


Annotated TAIR IDAT1G32120.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557), Protein of unknown function DUF716 (InterPro:IPR006904); BEST Arabidopsis thaliana protein match is: Aminotransferase-like, plant mobile domain family protein (TAIR:AT1G51538.1); Has 16736 Blast hits to 9656 proteins in 576 species: Archae - 4; Bacteria - 1182; Metazoa - 7098; Fungi - 2631; Plants - 1178; Viruses - 174; Other Eukaryotes - 4469 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:11552926-11558608 | Forward length=1206
E-Value9E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.35017106888395
Replicate 20.19353324173259
Replicate 30.16177838669825
Condition 2: 8 Hour
Replicate 10.65472689570145
Replicate 20.78497714525356
Replicate 30.37396223868388
Condition 3: 24 Hour
Replicate 10.28743267750782
Replicate 20.1988053647048
Replicate 30.66373801066095


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_201239.p1 GENE.S_Transcript_201239~~S_Transcript_201239.p1 ORF type:5prime_partial len:228 (+),score=33.57,PMD|PF10536.5|9.8e-14 S_Transcript_201239:2-685(+)
TTGGATTGTGTCGAGCAATATCTCCCTCATCGAGTATCAATGCAGTTTGGGTTTGATCAAGACATCCCTGTGGATATTCCGAGGCTTGATTGTGGTCATGAGATCGCTTGGGAGAATTACAATAGGCCAATCGACAATAATATGAAGTTATATGTTCCATCGAGACTTACTAAACCGGATGTAACAACACGTTACTTCAAGTTGTTGGAGAAACCAAATGTAGTGGTGGAAGAAAGGATGAGAATGAAATTGGATAACAATGAACGAGAAGTTCCACCTGGTTTTTCACCGATTGGAAACGAGGTTGTAGTGGATAATGAGTTTGTTGCTACTTCTAGTCCTAGTTTTTCCCATATCAATAAGACGGAAGATGAGGATGATTCCGTTGATTCGTTGACATTGTCTCAGTTGTTTAAGGTTAGTTCTACAAGTAAGGAAACTCGAAGTTGTACTTTAATATCAAATGAATCGGAAGGCCCTCGATCAAGGATAGGATCCAATATGGATGATGAAATTGATAGAGATGTTGCGAGTCCAATTACGAGCAATAACAAGAAAGAAATCGGAACAAGTAGTTATGTTACTCCTACGTGCACAGAAAAGAAACTTGATCTTGCAGACCGGATTGCTAGGCTACAGAGAATTGTGGACGTGCTAAAAGGAGCGAAAACTATCCAGCTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_201239.p1 GENE.S_Transcript_201239~~S_Transcript_201239.p1 ORF type:5prime_partial len:228 (+),score=33.57,PMD|PF10536.5|9.8e-14 S_Transcript_201239:2-685(+)
LDCVEQYLPHRVSMQFGFDQDIPVDIPRLDCGHEIAWENYNRPIDNNMKLYVPSRLTKPDVTTRYFKLLEKPNVVVEERMRMKLDNNEREVPPGFSPIGNEVVVDNEFVATSSPSFSHINKTEDEDDSVDSLTLSQLFKVSSTSKETRSCTLISNESEGPRSRIGSNMDDEIDRDVASPITSNNKKEIGTSSYVTPTCTEKKLDLADRIARLQRIVDVLKGAKTIQL*

Click here to download the sequence:
Link to NCBI Protein BLAST