Transcript Information: S_Transcript_201284.p1


Annotated TAIR IDAT3G42723.1
Annotated Gene Nameaminoacyl-tRNA ligases;ATP binding;nucleotide binding
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:14838392-14841189 | Reverse length=818
E-Value1E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.37339670100381
Replicate 20.84423939633348
Replicate 30.89390812650105
Condition 2: 8 Hour
Replicate 10.87042409457686
Replicate 20.94167220039666
Replicate 30.78846885273528
Condition 3: 24 Hour
Replicate 11.0309447565714
Replicate 21.0406852254445
Replicate 30.70776145014356


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_201284.p1 GENE.S_Transcript_201284~~S_Transcript_201284.p1 ORF type:3prime_partial len:784 (+),score=134.89,RVT_1|PF00078.23|3.3e-21,gag-asp_proteas|PF13975.2|1.3e-07,Retrotrans_gag|PF03732.13|2.7e+03,Retrotrans_gag|PF03732.13|1.3e-06,RVP_2|PF08284.7|5.3e-07,Asp_protease_2|PF13650.2|3e-06 S_Transcript_201284:475-2823(+)
ATGGTGAATACAAGAATGGAAGAGCAGATAAAGGAATTAGACCAGAAATTTGGAGAGAAATATGCTAACATTGAGCAGCAGTTGGCAAAATTAATGGAAATGATATCCAATAAGACGCTAGATTCCTCTTCAGATTCTGAGGTAAATACTCAACATACATCAAATAAACCTTTACATTTCTCTCCTAAGGTAGAATTTCCCCAATTTGAAGGCAAGGATACTAATATGTGGATATTGAAGTGCAATAGATATTTTGAATTGTGTAATATCCCTGAGGCTCAGAAAATAAATCTTGCATCAATACATATGGTGGGAAGAGCTGCTGTATGGTTTAGCAGCTATATCATGTCTAGGCCTCATATTTCTTGGGGGGAATTTGTGATAGATGTGGGTATGAGGTTCAAAGATGATTCAGAAAGTAAAGTGGTAGAAAAATTTAATAAATTGCAACAATATGGAACTTTAGAGGACTATGTTGATCAGTTTGAAGGGCTTAAGGCTTTGATGTTGCAAAGAAACCCTCTCTTACCTGCCAATTATTTTCTTGACAGCTTCATTGCTGGCCTTAAACCAACTTTAAAACCATTTGTCATGGATTTTAATCCAGCTACCTTAGCTGCAACAGTTCACTATGCAAGATTGCAAGAGGAAGCAATAGCTTCTCAAAGGCCTCAGATTAACAACAGGAATTTCTATGCTACACCACAAAACAAATTCCAATCTTCTTCTACTTATCTTAACAATCAGATCAAGAATCATTCAAGTCCATCATATACACGATCATCACCCTCTATACATTCTAAACCCATACTACCTACTCCTTCTCCTTCTTCATCTTCTTCTATCTCTTCTTCTTCCTCTTCTTCTAATCAGAAATCTATCTCTCAGTACCCAAGGTATGTGTCAGCTCAAGAAAGGGTGGATAAAATAGCTAAGGGTCTTTGCTATTACTGTGATCAGCCTTATCATAGAAATCATATATATGCCAACAAGAAAACACAATTGTTTTTGGTTGAAGTGGCTGGGGAGGATGATTGTCCAGAAAATGTAGCATGCTTATCTGAGACTAATCAAGAAGTGACTGAATTTTATGAGATGCATAATATGGAACCTGTTATTTCAGTAAACGCATTGAGTGGGGTACAAGGTCAGAGGACTATGAGGGTTACTGCTTATGTTGGGAAGAAAGCTTTACAAGTGTTAATAGATTCGGGCAGCACCCATAATTTCTTGGATTGTGCTGTTGCTAAGAAGTTGGGGTGCCTCTTGAAGCCTATTCCTCCACAGACTGTAACTGTGGCAGATGGAGCTCAAGTTCCTTGCAAGTTCATGTGTGAGAATTTCTATTGGAAATTGCAGAGACATAATTTCAGTTCCAATGTATTACTGCTACCACTGGCTAGTTGTGATATGGTATTGGGAACACAATGGTTGTGTACTTTGGGAGACATCAGTTGGAATTTTAGTAAGCTCACTATGAAGTTTCATTATGAGGGCCTAGATATCTTGTTAAGGGGATTACAACCTAAACAACTTAAGTTGGTAAAAGGGGAACCAAAACTTTTGGAGAATGCTGCTCAACTATGTTTGTTACAGTTAATACAAGGGCCTGACATGATTCAATGTGATGATACTGTTAACAAGAATTCTGCTCTGAGTACTTTTTGTTTTTCTGTAGAGTGTAAGGATACTCCTGCAATCATCCAAGATGTCTTAAATGAGTTTGAGGACATCTTTGCAGAACCAAAGGAGTTACCTCCATCTAGAGGACCCTTTGATCATCGAATTCCTCTCATCTCTGGTTCTAATCCTATAAGTGTAAGGCCTTATAGATACCCCCTTAAACAGAGGGACATCATTGAGCAACAAGTGCAAGATATGCTTGACAGGGGCATCATTCAGCACAGTTCAAGTCCATTTGCATCTCCTGTGGTTTTGGTGGGCAAAAAGGATGGGAGTTGGAGGCTGTGTGTAGACTATAGAGCTTTGAACAACCAAACTGTTAAAGACAAATTCCCTATTCCAGTTGTAGATGAGCTGATTGATGAACTAGCAGGAGCAGCAGTTTTCAGCAAAATAGATTTGAGATCAGGTTATCACCAGATCAGAATGGCCAACCAAGATGTGTTCAAGACAGCTTTCAAGACTCACTATGGTCACTTTGAGTTTCTAGTTATGCCTTTTGGCCTAACTAATGCCCCTGCCACATTTCAAGGGTTTATGAATCATGTTTTTAAATCCTATCTGCGCAAATTTGTCTTAGTTTTTTTTGATGATATATTAGTTTACAACCCTTCCCTTGATATTCATATTCACCATCTCACTCTTGTATTTTCTGTGATGACGAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_201284.p1 GENE.S_Transcript_201284~~S_Transcript_201284.p1 ORF type:3prime_partial len:784 (+),score=134.89,RVT_1|PF00078.23|3.3e-21,gag-asp_proteas|PF13975.2|1.3e-07,Retrotrans_gag|PF03732.13|2.7e+03,Retrotrans_gag|PF03732.13|1.3e-06,RVP_2|PF08284.7|5.3e-07,Asp_protease_2|PF13650.2|3e-06 S_Transcript_201284:475-2823(+)
MVNTRMEEQIKELDQKFGEKYANIEQQLAKLMEMISNKTLDSSSDSEVNTQHTSNKPLHFSPKVEFPQFEGKDTNMWILKCNRYFELCNIPEAQKINLASIHMVGRAAVWFSSYIMSRPHISWGEFVIDVGMRFKDDSESKVVEKFNKLQQYGTLEDYVDQFEGLKALMLQRNPLLPANYFLDSFIAGLKPTLKPFVMDFNPATLAATVHYARLQEEAIASQRPQINNRNFYATPQNKFQSSSTYLNNQIKNHSSPSYTRSSPSIHSKPILPTPSPSSSSSISSSSSSSNQKSISQYPRYVSAQERVDKIAKGLCYYCDQPYHRNHIYANKKTQLFLVEVAGEDDCPENVACLSETNQEVTEFYEMHNMEPVISVNALSGVQGQRTMRVTAYVGKKALQVLIDSGSTHNFLDCAVAKKLGCLLKPIPPQTVTVADGAQVPCKFMCENFYWKLQRHNFSSNVLLLPLASCDMVLGTQWLCTLGDISWNFSKLTMKFHYEGLDILLRGLQPKQLKLVKGEPKLLENAAQLCLLQLIQGPDMIQCDDTVNKNSALSTFCFSVECKDTPAIIQDVLNEFEDIFAEPKELPPSRGPFDHRIPLISGSNPISVRPYRYPLKQRDIIEQQVQDMLDRGIIQHSSSPFASPVVLVGKKDGSWRLCVDYRALNNQTVKDKFPIPVVDELIDELAGAAVFSKIDLRSGYHQIRMANQDVFKTAFKTHYGHFEFLVMPFGLTNAPATFQGFMNHVFKSYLRKFVLVFFDDILVYNPSLDIHIHHLTLVFSVMTK

Click here to download the sequence:
Link to NCBI Protein BLAST