Transcript Information: S_Transcript_20173.p1


Annotated TAIR IDAT5G19820.1
Annotated Gene NameARM repeat superfamily protein
Annotated Gene Symbol(s)emb2734
Annotation TypeOrtholog
Chromosome Positionchr5:6695731-6701247 | Reverse length=1116
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 142.340922883523
Replicate 248.778276232601
Replicate 350.607746038928
Condition 2: 8 Hour
Replicate 148.290403413712
Replicate 245.694881320258
Replicate 344.734278817257
Condition 3: 24 Hour
Replicate 141.999389092035
Replicate 235.884368329217
Replicate 335.345177873836


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_20173.p1 GENE.S_Transcript_20173~~S_Transcript_20173.p1 ORF type:complete len:1176 (+),score=281.54,HEAT_2|PF13646.2|1.2e+02,HEAT_2|PF13646.2|2.9e+02,HEAT_2|PF13646.2|1,HEAT_2|PF13646.2|0.017,HEAT_2|PF13646.2|4e-09,HEAT_2|PF13646.2|0.93,HEAT_2|PF13646.2|4.1,HEAT_2|PF13646.2|0.026,HEAT_2|PF13646.2|0.0007,HEAT_EZ|PF13513.2|1.8e+03,HEAT_EZ|PF13513.2|1.1e+04,HEAT_EZ|PF13513.2|2.3e+02,HEAT_EZ|PF13513.2|0.0068,HEAT_EZ|PF13513.2|1.6e+02,HEAT_EZ|PF13513.2|7e-05,HEAT_EZ|PF13513.2|94,HEAT_EZ|PF13513.2|0.00033,HEAT_EZ|PF13513.2|0.055,HEAT_EZ|PF13513.2|6.8e+03,HEAT_EZ|PF13513.2|7.7e+03,HEAT_EZ|PF13513.2|5.8e+02,HEAT_EZ|PF13513.2|35,HEAT_EZ|PF13513.2|0.041,HEAT_EZ|PF13513.2|8.2e+03,HEAT|PF02985.18|3.2e+03,HEAT|PF02985.18|4.4,HEAT|PF02985.18|0.027,HEAT|PF02985.18|1e+04,HEAT|PF02985.18|11,HEAT|PF02985.18|0.0011,HEAT|PF02985.18|6.5,HEAT|PF02985.18|5.4e+03,HEAT|PF02985.18|6.7e+03,HEAT|PF02985.18|1.6e+02,HEAT|PF02985.18|3.5e+02,HEAT|PF02985.18|5.4e+03,HEAT|PF02985.18|1.2e-05,HEAT|PF02985.18|2e+02,Vac14_Fab1_bd|PF12755.3|6.9e+02,Vac14_Fab1_bd|PF12755.3|3.6e+03,Vac14_Fab1_bd|PF12755.3|0.00017,Vac14_Fab1_bd|PF12755.3|17,Vac14_Fab1_bd|PF12755.3|5.9,Vac14_Fab1_bd|PF12755.3|4.7e+03,Vac14_Fab1_bd|PF12755.3|47,MMS19_C|PF12460.4|0.00096,MMS19_C|PF12460.4|1.9e+02,MMS19_C|PF12460.4|0.81,MMS19_C|PF12460.4|0.53,MMS19_C|PF12460.4|14,DUF577|PF04510.8|2.7e-08,DUF577|PF04510.8|2.6e+02,Cnd1|PF12717.3|2.4e+03,Cnd1|PF12717.3|0.011,Cnd1|PF12717.3|0.094,Cnd1|PF12717.3|20,Adaptin_N|PF01602.16|0.013,Adaptin_N|PF01602.16|0.011,Adaptin_N|PF01602.16|1.2e+02,Adaptin_N|PF01602.16|4.1e+02 S_Transcript_20173:162-3530(+)
ATGGATCCCGAGTCAACACAGATCCAGCAATCACAACTGGCTGCTCTTCTAGGCCCTGATCCTGCTGCCTTCGAGTCTCTTATTTCACATCTCATGTCCTCCTCCAACGAGCAGCGATCTCAGGCTGAATTAGCCTTCAATCTCTGCAAACAAACCGATCCTGATTCCCTCACCCTCAAACTCGCTCATTTGCTTCAGTTCTCTCCTCACCTTGAAGCTCGTGCCATGTCCGCTATTCTCCTTCGCAAACTCCTCACTCGCCGTGGCTCCTCCGATGATTCCTCTTATGTCTGGCCTCGCCTTTCTCTCTCCTCTCAGTCCTCTCTCAAATCGCTTCTTCTCTCCTGTGTCCAGCGTCAGGATACCAGTTCTATCTCCAAGAAGCTCTGCGACACTGTTTCCGAACTCGCTTCCGGTATCCTCCCTGACAACGGCTGGCCTGAGCTTCTCCCTTTCATGTTCCAGTGCGTTTCCTCCGATTCCCCCAAACTCCAGGAGTCCGCCTTTTTGATTTTCGCACAACTCTCTCAGTTCATCGGGGAGTCCATCTTGGTCCCCTACATTAAGGAGCTTCATGCCGTCTTCTTGAATTGCTTAACCAACTCTCCCAGCTCCGACGTCAGGATCGCCGCCTTGAATGCCGTCATCAACTTCATCCAGTGCCTTGAGACCTCCGCCGACAGGGATAGGTTCCAGGACCTCTTGCCTGCCATGATGAGGACCTTGACCGAGGCCTTGAACTCCGGCCACGAGTCCACCGCTCAGGAAGCCCTCGAGTTGTTGATCGAGTTGGCTGGGACCGAGCCCAGGTTCTTGAGGAGACAGCTGGTGGATGTGGTGGGGTCTATGCTCCAAATCGCCGAGGCTGAGCAGTTAGAGGAAGGTACTAGACACTTGGCTATTGAGTTTGTGATAACCCTAGCTGAGGCCAGAGAGAGGGCTCCTGGTATGATGAGAAAGTTGCCCCAGTTCATTAGTAGCTTGTTTGGGATTCTCATGAAAATGCTTTTGGATATTGAGGATGACCCTGCTTGGCATACTGCTGAGGTTGAGGATGAGGATGCTGGTGAGACTTCCAATTACAGTGTTGCTCAGGAATGTCTTGACCGCCTCGCCATGGCTCTTGGTGGTAATACTATTGTTCCCGTCGCATCTGAGCTCTTGCCTGCTTACCTGGCTGCCCCTGAGTGGCAGAAGCATCACGCTGCTCTCATTGCTCTTGCCCAGATTGCTGAGGGTTGCTCCAAGGTAATGATTAAAAATTTGGAGCAAGTAGTGAGTATGGTATTGAATTCATTCCAAGACCCTCATCCAAGAGTGAGGTGGGCAGCTATCAATGCCGTTGGACAGTTATCTACTGACCTGGGTCCCGATTTGCAAGTCCAGTATCACCAGAGAGTTCTCCCCGTCCTTGCTGGTGCTATGGATGACTTTCAAAATCCTAGAGTACAGGCACATGCAGCTTCAGCTGTCCTCAACTTCAGTGAGAACTGCACTCCCGATATTTTAACTCCTTACTTGGATGGGATAGTGAGCAAACTGCTTGTCCTTCTACAGAATGGCAAACAATTGGTTCAAGAAGGAGCCTTGACTGCATTGGCATCAGTTGCTGATTCTTCTCAGGAACATTTCCAAAAATACTATGATGCTGTCATGCCTTATTTGAAAGCTATTCTTGTCAATGCAACGGACAAATCTAACCGTATGCTTAGAGCAAAAGCAATGGAGTGTATTAGTTTGGTGGGAATGGCTGTTGGCAAGGAGAAGTTCAGGGAGGATGCTAAACAGGTCATGGAGGTGCTTATGTCCCTGCAAGGATCTCAACTAGAGTCAGACGATCCAACAACAAGTTACATGCTACAGGCCTGGGCTCGACTTTGCAAGTGCCTGGGACAGGATTTCCTTCCTTACATGAGTGTTGTCATGCCACCTCTACTTCAGTCTGCTCAGCTTAAACCTGATGTGACCATCACCTCCGCTGACTCGGACAATGAGATTGAAGAATCTGATGATGAGAGTATGGAGACCATTACTCTGGGAGACAAGAGAATAGGGATCAAGACTAGTGTTTTAGAGGAGAAGGCAACAGCATGCAACATGCTATGTTGTTATGCAGATGAATTGAAGGAAGGATTTTATCCTTGGATCGATCAGGTTGCGCCAACTCTTGTCCCACTTCTCAAATTTTATTTTCATGAAGAAGTTCGCAGAGCTGCTGTTTCTGCCATGCCAGAGCTACTGCGTTCAGCAAAACTAGCCGTAGAGAAAGGGCTTGCTCAAGGTCGCAATGAGTCGTATGTCAAGCAGTTATCTGACTACATAATACCAGCCTTGGTGGAGGCCTTGCACAAGGAGCCTGATATTGAAATTTGTGCAAGTATGTTGGATGCATTAAACGAGTGTCTACAGATTTGTGGGACTCTTTTGGATGAAGCTCAAGTGAGAGCCATTGTCGATGAAATTAAACAGGTTCTCACTGCTAGCTCGAGTAGAAAAAGAGAGCGAGCAGAGAGGGCTAAAGCAGAGGACTTTGATGCTGAAGAAGGAGAGCTACTTAAGGAGGAAAATGAACAGGAGGAGGAAGTTTTTGACCAAGTGGGTGAAATATTGGGAACATTAATCAAAACATTCAAGGGCTCTTTCTTGCCCTTATTTGATGAGCTGACATCTTATCTAACACCTATGTGGGGTAAGGATAAGACAGCTGAAGAAAGGAGGGTAGCAATTTGTATTTTTGATGATGTTGCAGAGCAATGTCGTGAAGCGGCTCTTAAATATTATGACACCTATCTTCCTTTCCTATTTGAAGCTTGCAACGACGAAAGTCCAGATGTTAGACAGGCAGCTGTGTATGGACTAGGCGTGTGTGCTGAGTTTGGTGGCACAGTATTTAAGCCTTTAGTTGGAGAGGCTCTCTCTAGATTAAATGTTGTCATCCGACATCCTAATGCTCTCCAGTCTGAAAATGTAATGGCATATGATAATGCTGTATCAGCTCTTGGAAAGATATGCCAATTTCATCGGGACAGTATTGATTCAGCCCAGGTTATTCCTGCATGGTTAAGCTGTTTGCCGATAAAAGGAGACTTGATTGAGGCCAAAATAGTCCACGATCAGCTTTGCTCTATGGTTGAAAGGTCTGATATGGAGCTCTTGGGTCCCAACAATCAATATCTACCAAAGATAATTCTGGTCTTTGCAGAGGTTCTCTGTGCTGGAAAAGATTTAGCTACAGAGCAAACGGCCAGCAGAATGGTCAACCTGTTGAGGCAGCTGCAACAGACGCTGCCACCAGCGACATTGGCTTCAACATGGTCTTCATTGCAGCCACAGCAGCAGCTCACACTGCAGTCCATCCTATCATCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_20173.p1 GENE.S_Transcript_20173~~S_Transcript_20173.p1 ORF type:complete len:1176 (+),score=281.54,HEAT_2|PF13646.2|1.2e+02,HEAT_2|PF13646.2|2.9e+02,HEAT_2|PF13646.2|1,HEAT_2|PF13646.2|0.017,HEAT_2|PF13646.2|4e-09,HEAT_2|PF13646.2|0.93,HEAT_2|PF13646.2|4.1,HEAT_2|PF13646.2|0.026,HEAT_2|PF13646.2|0.0007,HEAT_EZ|PF13513.2|1.8e+03,HEAT_EZ|PF13513.2|1.1e+04,HEAT_EZ|PF13513.2|2.3e+02,HEAT_EZ|PF13513.2|0.0068,HEAT_EZ|PF13513.2|1.6e+02,HEAT_EZ|PF13513.2|7e-05,HEAT_EZ|PF13513.2|94,HEAT_EZ|PF13513.2|0.00033,HEAT_EZ|PF13513.2|0.055,HEAT_EZ|PF13513.2|6.8e+03,HEAT_EZ|PF13513.2|7.7e+03,HEAT_EZ|PF13513.2|5.8e+02,HEAT_EZ|PF13513.2|35,HEAT_EZ|PF13513.2|0.041,HEAT_EZ|PF13513.2|8.2e+03,HEAT|PF02985.18|3.2e+03,HEAT|PF02985.18|4.4,HEAT|PF02985.18|0.027,HEAT|PF02985.18|1e+04,HEAT|PF02985.18|11,HEAT|PF02985.18|0.0011,HEAT|PF02985.18|6.5,HEAT|PF02985.18|5.4e+03,HEAT|PF02985.18|6.7e+03,HEAT|PF02985.18|1.6e+02,HEAT|PF02985.18|3.5e+02,HEAT|PF02985.18|5.4e+03,HEAT|PF02985.18|1.2e-05,HEAT|PF02985.18|2e+02,Vac14_Fab1_bd|PF12755.3|6.9e+02,Vac14_Fab1_bd|PF12755.3|3.6e+03,Vac14_Fab1_bd|PF12755.3|0.00017,Vac14_Fab1_bd|PF12755.3|17,Vac14_Fab1_bd|PF12755.3|5.9,Vac14_Fab1_bd|PF12755.3|4.7e+03,Vac14_Fab1_bd|PF12755.3|47,MMS19_C|PF12460.4|0.00096,MMS19_C|PF12460.4|1.9e+02,MMS19_C|PF12460.4|0.81,MMS19_C|PF12460.4|0.53,MMS19_C|PF12460.4|14,DUF577|PF04510.8|2.7e-08,DUF577|PF04510.8|2.6e+02,Cnd1|PF12717.3|2.4e+03,Cnd1|PF12717.3|0.011,Cnd1|PF12717.3|0.094,Cnd1|PF12717.3|20,Adaptin_N|PF01602.16|0.013,Adaptin_N|PF01602.16|0.011,Adaptin_N|PF01602.16|1.2e+02,Adaptin_N|PF01602.16|4.1e+02 S_Transcript_20173:162-3530(+)
MDPESTQIQQSQLAALLGPDPAAFESLISHLMSSSNEQRSQAELAFNLCKQTDPDSLTLKLAHLLQFSPHLEARAMSAILLRKLLTRRGSSDDSSYVWPRLSLSSQSSLKSLLLSCVQRQDTSSISKKLCDTVSELASGILPDNGWPELLPFMFQCVSSDSPKLQESAFLIFAQLSQFIGESILVPYIKELHAVFLNCLTNSPSSDVRIAALNAVINFIQCLETSADRDRFQDLLPAMMRTLTEALNSGHESTAQEALELLIELAGTEPRFLRRQLVDVVGSMLQIAEAEQLEEGTRHLAIEFVITLAEARERAPGMMRKLPQFISSLFGILMKMLLDIEDDPAWHTAEVEDEDAGETSNYSVAQECLDRLAMALGGNTIVPVASELLPAYLAAPEWQKHHAALIALAQIAEGCSKVMIKNLEQVVSMVLNSFQDPHPRVRWAAINAVGQLSTDLGPDLQVQYHQRVLPVLAGAMDDFQNPRVQAHAASAVLNFSENCTPDILTPYLDGIVSKLLVLLQNGKQLVQEGALTALASVADSSQEHFQKYYDAVMPYLKAILVNATDKSNRMLRAKAMECISLVGMAVGKEKFREDAKQVMEVLMSLQGSQLESDDPTTSYMLQAWARLCKCLGQDFLPYMSVVMPPLLQSAQLKPDVTITSADSDNEIEESDDESMETITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFYPWIDQVAPTLVPLLKFYFHEEVRRAAVSAMPELLRSAKLAVEKGLAQGRNESYVKQLSDYIIPALVEALHKEPDIEICASMLDALNECLQICGTLLDEAQVRAIVDEIKQVLTASSSRKRERAERAKAEDFDAEEGELLKEENEQEEEVFDQVGEILGTLIKTFKGSFLPLFDELTSYLTPMWGKDKTAEERRVAICIFDDVAEQCREAALKYYDTYLPFLFEACNDESPDVRQAAVYGLGVCAEFGGTVFKPLVGEALSRLNVVIRHPNALQSENVMAYDNAVSALGKICQFHRDSIDSAQVIPAWLSCLPIKGDLIEAKIVHDQLCSMVERSDMELLGPNNQYLPKIILVFAEVLCAGKDLATEQTASRMVNLLRQLQQTLPPATLASTWSSLQPQQQLTLQSILSS*

Click here to download the sequence:
Link to NCBI Protein BLAST