Transcript Information: S_Transcript_201773.p1


Annotated TAIR IDAT1G63440.1
Annotated Gene Nameheavy metal atpase 5
Annotated Gene Symbol(s)HMA5
Annotation TypeOrtholog
Chromosome Positionchr1:23527655-23531109 | Forward length=995
E-Value1.9E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0471539411677
Replicate 21.3334653029267
Replicate 31.824006865411
Condition 2: 8 Hour
Replicate 11.9919320625893
Replicate 21.3521446980054
Replicate 32.8108810028547
Condition 3: 24 Hour
Replicate 13.0006708091475
Replicate 22.4905287446536
Replicate 33.0488185544646


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_201773.p1 GENE.S_Transcript_201773~~S_Transcript_201773.p1 ORF type:3prime_partial len:182 (+),score=43.44,HMA|PF00403.22|1.2e-14,HMA|PF00403.22|0.29 S_Transcript_201773:241-783(+)
ATGTATACGTATAATTTATCATCAACGAAAACAAAACCACAACAACAATATTTCAACTGGGAGGACACAGAGAAAGGGGAAAAACAGCAAGGAAGAAAAAAGAAAACAAAGGCAATGGCAGCAGCCAAATTCCTGAGTTTCTGTATAAGAAATGAGAGCTTATTATCACCAAGACCCCATTATCCATCAATGCCAAAATACCCAAAAGGGGTTGAAGACAAGTTTGAATTTGATGGTTCTTGTGAATCAAAAGCTCTGTTTTCTGTCATAGGAATGACTTGCTCTGCTTGTGCTGGTTCTGTTGAGAAGGCAATCAAAAGGCTTCCTGGTATTCGTGAGGCCATTGTTGATGTTTTGAATAACAGGGCTCAAGTCATTTTTTACCCCTCTTTTGTCAATGAAGAAAAAATCCGTGAAACAATTGAGGATGTTGGATTTGAAGCTGCATTACTGGATGACAATGTTAGTGAAGGCACTATTCAGGTTTGCCGAGTTCACATAAAAGGAATGACCTGCACTACTTGCTCAAATGCTGTTGAATCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_201773.p1 GENE.S_Transcript_201773~~S_Transcript_201773.p1 ORF type:3prime_partial len:182 (+),score=43.44,HMA|PF00403.22|1.2e-14,HMA|PF00403.22|0.29 S_Transcript_201773:241-783(+)
MYTYNLSSTKTKPQQQYFNWEDTEKGEKQQGRKKKTKAMAAAKFLSFCIRNESLLSPRPHYPSMPKYPKGVEDKFEFDGSCESKALFSVIGMTCSACAGSVEKAIKRLPGIREAIVDVLNNRAQVIFYPSFVNEEKIRETIEDVGFEAALLDDNVSEGTIQVCRVHIKGMTCTTCSNAVES

Click here to download the sequence:
Link to NCBI Protein BLAST