Transcript Information: S_Transcript_201802.p1


Annotated TAIR IDATMG00860.1
Annotated Gene NameDNA/RNA polymerases superfamily protein
Annotated Gene Symbol(s)ORF158
Annotation TypeHomolog
Chromosome PositionchrM:235916-236392 | Forward length=158
E-Value4E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.50606378187703
Replicate 20.39485976836715
Replicate 30.51573646766221
Condition 2: 8 Hour
Replicate 10.38166246652587
Replicate 20.57556210146948
Replicate 30.95372919932803
Condition 3: 24 Hour
Replicate 10.342089898063
Replicate 20.25351019660344
Replicate 30.3385509316123


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_201802.p1 GENE.S_Transcript_201802~~S_Transcript_201802.p1 ORF type:3prime_partial len:894 (+),score=154.24,RVT_1|PF00078.23|2.3e-23,rve|PF00665.22|2e+03,rve|PF00665.22|2.4e-19 S_Transcript_201802:442-3120(+)
ATGTTCCACATGAAAAAAATTCTTCCTTCTACTGTTAACCCACCAAAGTTGGACCTTAATCCCCTTCCTACTCATTTGAAGTACGCTTTTCTAAGTGAGAATGCAACTTTACCGGTGATTATTTCTAATTCACTCACTTCTCCCCAAGAAAATAAACTACTTCATGTTATTCGATTGCATAAAGAGGCTATAGGTTGGACTTTGGCTAACATTAAGGGTATTTATCCTGCCACTTGTATGCATAGAATTCTTTTAGAGGAGACTGCTAAGCCACTTAGAGAAAATCAGCGTAGGTTGAATCCGCCTATGATGGAAGTTGTAAACAAAGAAATTTTGAAATGGCTTGATGCAGGTGTAATATACCCTATCTCAGATTCCCAATGGGTTAGTCCCATCCATGTAGTGCCTAAAAAGACAGGCATGACTGTTGTAGAGAACAAGGAGGGAAACTTAGTTGCCACTAGGGTACCCAATAGTTGGAGGGTTTGTATTGATTATAGGAAACTCAATTCTGTGACAAGGAAAGATCATTTTCCCCTCCCCTTCATTGATCAAATGTTGGAAAGACTTGCAGGTAAATCCTTCTTTTGTTTTCTTGATGGCTATTCTGGTTATACTCAAATTGCTATTGCTCCAGAGGACCAAGAAAAGACCACATTTACTTGTCCTTTTGGTACTTATGCTTTCAGGCGTATGCCTTTTGGTTTGTGCAATGCGCCAGCTACTTTTCAGCGATGCATGATGAGTATGTTTTCTGATTTTATTGAGCATATTATGGAGGTTTTCATGGATGATTTTACCGTGCATGGTGATTCATTTGATGATTGTCTTGAGAATCTTTCTCGTGTGCTTCAACGTTGTGCTAAGGCTAACCTTGTGTTGAATTTTGAGAAATGTCATTTCATGGTCATGGAAGGTGTAGTCTTAGGACATGTTGTGTCTTCTAGAGGTCTTGAGGTGGATAAGGCTAAGATAGAAGTCATTGAGAATTTGCCCTACCCCACTTGTGTTAGAGAAGTTAGGTCATTTTTAGGGCATGCTGGCTTTTATCGCAGGTTTATCAAGGATTTTTCTAAGATTGCCTTGCCATTTTGTAACTTGTTAGGAAAAGATGTGAAATTTGACTTTGGTGATTCTTGTAAATGTGCATTTGATGAGTTGAAGAAAAGACTTGTGACTGCCCCTGTAATCCAGCCACCTAATTGGGATTTACCTTTTGAGCTGATGTGTGATGCTAGCGATAAAGCATTAGGTGTTGTCTTAGGTCAAAGGAAAGACAAAGTGCCCTATGTGATTTCTTATGCATCCAGGTCCTTAGATCCTGCCCAATGCAATTACACTGTAACCGAGAAGGAATTATTTGCTATTGTGTTTGCTCTAGAAAAGTTTCGTTCATATTTGCTTGGGACTAAGGTTATTGTCTATTCTGATCATGCAGCATTGAAGTACTTGTTTAAAAAGAAAGAGGCTAAACCAAGGCTCTTGAGGTGGATTTTACTTTTACAGGAATTCAATGTTGAGTACAGGGATAAGAAAGGAAAAGAGAACTTTGTTGCTGATCACTTGAGTCGTTTGATCCATGAAGGAGGAGAGAACTTAGCTTTAGGAAATTTCCCAGATGAGCAGCTTTATATGATTGGGACTGAGTTGCCTTGGTACGCGGACATTGTCAATTATTTGGTAAGTAGGCAACTTCCTAAGGAATTAACTAGAGCTCAAAAGGAAAAGATTAAATCCGAGGCTAAATATTATCTATGGGATGAGCCCTATTTGTGGAGATCTTGTTCGGATCAAATAGTAAGACGATGTGTTCATCAAGGTGAGATCTCTTCTATTCTAGCTTTTTGTCATAGTCATGAGGGTGGAGGTCACTTTGGACCTAGGAGAACAGCCCTTAAGGTCTTAGAATGTGGTTTCTTTTGGCCTTCTATTCAAAAGGATGCATTTTTGTTTTGCAAAGCATGTGATCGTTGTCAAAAGATTGGCAATATAAGCAAAAGAAATGAGATGCCTTCAAATGTTTTTGTGGTTTGTGAGATTTTTGATGTTTGGGGCATTGATTTTATGGGTCCATTTCCACAGTCTTTTGGGAATTGTTACATTATTCTTGCAGTGGATTATGTGTCTAAATGGGTGGAAGCAAAGGCCACTAAAACTGATAATGCAAAAACTGTGATTGACTTTGTTAAGAGCCATATACTTGAGAGGTTTGGTGCCCCTAAAGCTATTGTTAGTGATAGAGGTACTCATTTTTGCAATAAAATCTTTTGGGCTTTGTTGGAAAGATATCATGTGAGGCATAAGATTTCTACTGCTTACCATCCTCAAACTAGTGGACAAGCTGAGATTTCTAATAGAGAGGTGAAACGCATCCTTGAGAAAATTGTCAATCCTTCTAGGAAAGATTGGAGTATGCGATTAGGTGAAGCATTATGGGCTTATAGGACAGCTTATAAGACTCCAATAGGGATGAGTCCTTTTAGGATGTTGTTTGGTAAAGCTTGTCATTTGCCTGTAGAACTTGAGCATAAATCTTTTTGGGCAATTAAGAAGTGTAATTTGGATTTCGAGTTAGCAGGTAAAGCTAGAATGCTTCAGTTGCAAGAACTTGAGGAGTTTAGGATGGATGCCTATGAGAATGCCATGTTATACAAAGATAGAACAAAGGCTTTCCATGAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_201802.p1 GENE.S_Transcript_201802~~S_Transcript_201802.p1 ORF type:3prime_partial len:894 (+),score=154.24,RVT_1|PF00078.23|2.3e-23,rve|PF00665.22|2e+03,rve|PF00665.22|2.4e-19 S_Transcript_201802:442-3120(+)
MFHMKKILPSTVNPPKLDLNPLPTHLKYAFLSENATLPVIISNSLTSPQENKLLHVIRLHKEAIGWTLANIKGIYPATCMHRILLEETAKPLRENQRRLNPPMMEVVNKEILKWLDAGVIYPISDSQWVSPIHVVPKKTGMTVVENKEGNLVATRVPNSWRVCIDYRKLNSVTRKDHFPLPFIDQMLERLAGKSFFCFLDGYSGYTQIAIAPEDQEKTTFTCPFGTYAFRRMPFGLCNAPATFQRCMMSMFSDFIEHIMEVFMDDFTVHGDSFDDCLENLSRVLQRCAKANLVLNFEKCHFMVMEGVVLGHVVSSRGLEVDKAKIEVIENLPYPTCVREVRSFLGHAGFYRRFIKDFSKIALPFCNLLGKDVKFDFGDSCKCAFDELKKRLVTAPVIQPPNWDLPFELMCDASDKALGVVLGQRKDKVPYVISYASRSLDPAQCNYTVTEKELFAIVFALEKFRSYLLGTKVIVYSDHAALKYLFKKKEAKPRLLRWILLLQEFNVEYRDKKGKENFVADHLSRLIHEGGENLALGNFPDEQLYMIGTELPWYADIVNYLVSRQLPKELTRAQKEKIKSEAKYYLWDEPYLWRSCSDQIVRRCVHQGEISSILAFCHSHEGGGHFGPRRTALKVLECGFFWPSIQKDAFLFCKACDRCQKIGNISKRNEMPSNVFVVCEIFDVWGIDFMGPFPQSFGNCYIILAVDYVSKWVEAKATKTDNAKTVIDFVKSHILERFGAPKAIVSDRGTHFCNKIFWALLERYHVRHKISTAYHPQTSGQAEISNREVKRILEKIVNPSRKDWSMRLGEALWAYRTAYKTPIGMSPFRMLFGKACHLPVELEHKSFWAIKKCNLDFELAGKARMLQLQELEEFRMDAYENAMLYKDRTKAFHD

Click here to download the sequence:
Link to NCBI Protein BLAST