Transcript Information: S_Transcript_201822.p1


Annotated TAIR IDAT5G08720.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase (InterPro:IPR005031); BEST Arabidopsis thaliana protein match is: Polyketide cyclase / dehydrase and lipid transport protein (TAIR:AT4G01650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2841536-2845335 | Reverse length=719
E-Value4.3E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.9293622565408
Replicate 212.192594229153
Replicate 312.49738037244
Condition 2: 8 Hour
Replicate 11.8238820665969
Replicate 21.7661985768205
Replicate 32.3840092716098
Condition 3: 24 Hour
Replicate 117.245960650469
Replicate 213.86667418816
Replicate 313.274760213219


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_201822.p1 GENE.S_Transcript_201822~~S_Transcript_201822.p1 ORF type:internal len:152 (-),score=20.28 S_Transcript_201822:1-453(-)
GCGCAAAACAGTAAGTACATTGCATCAAACCCTAGATTGTGCTTCAATGGCGGTGGCCAACAGGCGAGGGTAGTGAACGGGTATCGATATTGCAATGGATCAGTAGAAAGTTTTAGAAGGGATGTGGTGGAAGATTTGGAGAGAGAAGTTCGTGATCGAAAGGTTCATTGTGAGGTTGATGTGATTTCTTGGAGAGAGCGTCGTATTAAGGCCGAGATTTTGGTGAATTCTGATGTTGAATCTGTTTGGAATGCTCTCACTGATTATGAGCGTCTCGCTGATTTCGTCCCCAATCTCGTTTGCAGTGGAAGAATCCATTGTCCATATCCTGATAGAATATGGTTAGAGCAAAGAGGCTTGCAAAGGGCGCTGTATTGGCATATAGAGGCCCGTGTTGTCTTGGATCTCCGAGAATTCCTTAACTCTTCAAATGATCGTGAACTGCACTTCTCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_201822.p1 GENE.S_Transcript_201822~~S_Transcript_201822.p1 ORF type:internal len:152 (-),score=20.28 S_Transcript_201822:1-453(-)
AQNSKYIASNPRLCFNGGGQQARVVNGYRYCNGSVESFRRDVVEDLEREVRDRKVHCEVDVISWRERRIKAEILVNSDVESVWNALTDYERLADFVPNLVCSGRIHCPYPDRIWLEQRGLQRALYWHIEARVVLDLREFLNSSNDRELHFS

Click here to download the sequence:
Link to NCBI Protein BLAST