Transcript Information: S_Transcript_202001.p1


Annotated TAIR IDAT1G22860.1
Annotated Gene NameVacuolar sorting protein 39
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:8083400-8088867 | Forward length=961
E-Value1E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.88122520646293
Replicate 22.3377790259618
Replicate 32.3206091760822
Condition 2: 8 Hour
Replicate 12.1184162566688
Replicate 22.5186849461944
Replicate 33.387949288209
Condition 3: 24 Hour
Replicate 11.4466810258672
Replicate 21.5009146739303
Replicate 31.0022004399384


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_202001.p1 GENE.S_Transcript_202001~~S_Transcript_202001.p1 ORF type:3prime_partial len:151 (-),score=29.52 S_Transcript_202001:2-451(-)
ATGGCGAAAGTGGAGCCCTTGAATTCACGAACAGTATTAAAATCTGTTGCACATTTTGACCTATCATCAAACACGTCAATCTCATCACCCTCTTGCCTCGCAATTTCCGAAATCTCTGATGATGATTCTCAGTTGCTAATCTACCTTGGTACTCACTCTGGTGCCCTCGTTTTACTAACCCTAAATTCATTAATTGAGGATCATGATGATGGTGGTAATGGAAATGGTAATGGTAAGGTGAAGCTTTTGAGATTTGTATCTGTGAGTCACTCTCCCATTGGTTCTATACATGTATTTGCTCAATTTGGTACTGTGTTGGTTGTTTCTGATGGATATTTGTATTTTGTTGACTTGCAATTAATGCATCCTGTGAAGAGGTTAGGTCTTTTTAAGGGTGTTAGTGCTGTTGCTAGGAGAGTTTTGAGTTCTGGTTATCGGAGGTCAAATTCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_202001.p1 GENE.S_Transcript_202001~~S_Transcript_202001.p1 ORF type:3prime_partial len:151 (-),score=29.52 S_Transcript_202001:2-451(-)
MAKVEPLNSRTVLKSVAHFDLSSNTSISSPSCLAISEISDDDSQLLIYLGTHSGALVLLTLNSLIEDHDDGGNGNGNGKVKLLRFVSVSHSPIGSIHVFAQFGTVLVVSDGYLYFVDLQLMHPVKRLGLFKGVSAVARRVLSSGYRRSNS

Click here to download the sequence:
Link to NCBI Protein BLAST