Transcript Information: S_Transcript_202016.p1


Annotated TAIR IDAT5G58140.2
Annotated Gene Namephototropin 2
Annotated Gene Symbol(s)PHOT2, NPL1
Annotation TypeOrtholog
Chromosome Positionchr5:23524771-23529993 | Forward length=915
E-Value1.8E-118
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4350147724852
Replicate 25.9483011061927
Replicate 35.8763619874217
Condition 2: 8 Hour
Replicate 15.2268113522385
Replicate 21.5353229458636
Replicate 33.7616201655849
Condition 3: 24 Hour
Replicate 16.5320484947365
Replicate 24.7771759695242
Replicate 35.1927738481121


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_202016.p1 GENE.S_Transcript_202016~~S_Transcript_202016.p1 ORF type:5prime_partial len:204 (-),score=32.37,PAS_9|PF13426.2|1.9e-20,PAS_3|PF08447.7|3e-08,PAS|PF00989.20|1.7e-06 S_Transcript_202016:155-766(-)
CGGATTGAAAAAAATTTTGTGATAAGTGATCCCAGGCTTCCAGATAATCCAATTATATTTGCATCTGACAGCTTTCTTGAATTAACAGAGTATACACGGGAAGAAATTTTGGGAAGAAACTGTCGATTCCTCCAGGGACCAGAAACAGATCAGGCCACTGTCCAAAAAATAAGAGATGCTATTAAGGAACAGCGAGAAATTACCGTCCAGTTGATTAATTATACTAAAAGTGGGAAGAAGTTCTGGAACTTGTTTCATTTGCAGCCCATGAAAGACCAAAAGGGGGAGTTGCAATACTTTATTGGTGTGCAGCTAGATGGAAGTGATCATATTGAACCATTACATAATCGCTTGTCAGAAAACACTGAGCAACAAAGTGCGAAACTGGTCAAAGCTACTGCAGATAATGTTAATGAAGCCGTGAAAGAACTCCCCGATGCCAACTTGCGGCCAGAAGACCTGTGGGCTATTCATTCACAACATGTATATCCAAAGCCCCATAAGAGGGACTCCTCATCTTGGAAAGCAATACAAAAGGTTCAATTGAAGTTCTATATCTTCTCATATTTGTTAAGCCTCTCTTCTCCTTTTAACCACGAGTCATCAGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_202016.p1 GENE.S_Transcript_202016~~S_Transcript_202016.p1 ORF type:5prime_partial len:204 (-),score=32.37,PAS_9|PF13426.2|1.9e-20,PAS_3|PF08447.7|3e-08,PAS|PF00989.20|1.7e-06 S_Transcript_202016:155-766(-)
RIEKNFVISDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPETDQATVQKIRDAIKEQREITVQLINYTKSGKKFWNLFHLQPMKDQKGELQYFIGVQLDGSDHIEPLHNRLSENTEQQSAKLVKATADNVNEAVKELPDANLRPEDLWAIHSQHVYPKPHKRDSSSWKAIQKVQLKFYIFSYLLSLSSPFNHESSG*

Click here to download the sequence:
Link to NCBI Protein BLAST