Transcript Information: S_Transcript_202113.p1


Annotated TAIR IDAT3G55250.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 46 Blast hits to 46 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20479302-20480324 | Forward length=277
E-Value1.8E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2761119477457
Replicate 23.1932984885877
Replicate 32.4266758004738
Condition 2: 8 Hour
Replicate 12.9462710306565
Replicate 23.385213938906
Replicate 33.7863676666743
Condition 3: 24 Hour
Replicate 12.4431777588165
Replicate 22.8329764470434
Replicate 33.3186900533048


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_202113.p1 GENE.S_Transcript_202113~~S_Transcript_202113.p1 ORF type:5prime_partial len:152 (-),score=18.71 S_Transcript_202113:718-1173(-)
AAGAAACTTACTAGTAACAATAATAATGGTGGCAGATTTTTTGTCATCAAAGCTTACATTGAAAACACTAACCCCATCTCTGGTTTTGCCAACAAAGTTATTGGGTCATTGCCTGTAATTGGGCTCATTGCTAGGATTGTTAATGATGAAGGTGGCCTTGGTGGTGATATCATTGATTTTGCTGAGTTTAGAAGGAGGGTTGGTAATAAATGTACTATCATGGATTCTAGAGCTTTCTATGAGTTCCAAGATCGTCGCGGCAGGGTAATTTTCCTTTCTTTTTATGTAATTTTGTTCTTGTCAATTTTTCTTTTTTGTTGTTCTATTATCAGTTTTTCTGGGTTTCCTTTGGTAATTTTGGCCTTTTTTTATTTTAGTTCAAATTTTTTTCACCTGTTGTGTTTGAATTTTGGTATATGTATGGACATGTGGATGTTTGGTTGGAATACTGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_202113.p1 GENE.S_Transcript_202113~~S_Transcript_202113.p1 ORF type:5prime_partial len:152 (-),score=18.71 S_Transcript_202113:718-1173(-)
KKLTSNNNNGGRFFVIKAYIENTNPISGFANKVIGSLPVIGLIARIVNDEGGLGGDIIDFAEFRRRVGNKCTIMDSRAFYEFQDRRGRVIFLSFYVILFLSIFLFCCSIISFSGFPLVILAFFYFSSNFFHLLCLNFGICMDMWMFGWNTV*

Click here to download the sequence:
Link to NCBI Protein BLAST