Transcript Information: S_Transcript_202115.p1


Annotated TAIR IDAT3G55250.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 46 Blast hits to 46 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20479302-20480324 | Forward length=277
E-Value9.8E-116
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 193.577533563963
Replicate 297.563374601738
Replicate 3110.89593255464
Condition 2: 8 Hour
Replicate 1125.66747865453
Replicate 2134.6669070716
Replicate 3122.4277091338
Condition 3: 24 Hour
Replicate 191.635030746259
Replicate 289.257154032823
Replicate 398.431484983602


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_202115.p1 GENE.S_Transcript_202115~~S_Transcript_202115.p1 ORF type:complete len:308 (+),score=62.15 S_Transcript_202115:155-1078(+)
ATGATTAGAGATGATGCTAAAACAACCTCCACCACTGAAATAGTCATGGTAGTATTACTCACTCTCACTCTTTCTCCTTCCAAATTCTCAGCTAAAAATTTCTACACAACCCACAACCACCTCTTAAATTCTTCTCATCATCGTCAACTTATCCACCACCATAACCCCACAAAGAAACTTACTAGTAACAATAATAATGGTGGCAGATTTTTTGTCATCAAAGCTTACATTGAAAACACTAACCCCATCTCTGGTTTTGCCAACAAAGTTATTGGGTCATTGCCTGTAATTGGGCTCATTGCTAGGATTGTTAATGATGAAGGTGGCCTTGGTGGTGATATCATTGATTTTGCTGAGTTTAGAAGGAGGGTTGGTAATAAATGTACTATCATGGATTCTAGAGCTTTCTATGAGTTCCAAGATCGTCGCGGCAGGGCAGGGGATCCTTTATATGTCCTACTGTGCTGTTGGTTAGCAGCACTTGGTGCAGGTCTTCTAAAATCTGAAGAAATTTTGGAAGGAGTTGCACGGCTTCGTATTTCAAATGATATTGAGTTTGAAGAGCAGACTTTTATTGCTAAGATGACTGAAGCGAAGGAGAGACGAGCTAAATTGAGAGCAACAGGACCAACAATACCAATGGAGCTTCGAGTTGAGAAATCTCTTGATGCTATCTATGTTTGCTGCTTTGGCAAGGATTCCATAGAGGAGGAAGATGAAAAGCTACTAGTCATTATGCTTAACGCTGTCTTTCCCACAGTTCAACGACCAGAGATCAAAAGAATTATCAAAGAAAAGGCCAAAAAGGTGGCTGAAGGCAGCGAAGACATGGAATTTTCGACACAGCCTCAGCCCTTGTCCAAGGAAGCAATACAATCACAAATGAAGGACCTCGAATTCCTTAAGCAGAATAGCACCGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_202115.p1 GENE.S_Transcript_202115~~S_Transcript_202115.p1 ORF type:complete len:308 (+),score=62.15 S_Transcript_202115:155-1078(+)
MIRDDAKTTSTTEIVMVVLLTLTLSPSKFSAKNFYTTHNHLLNSSHHRQLIHHHNPTKKLTSNNNNGGRFFVIKAYIENTNPISGFANKVIGSLPVIGLIARIVNDEGGLGGDIIDFAEFRRRVGNKCTIMDSRAFYEFQDRRGRAGDPLYVLLCCWLAALGAGLLKSEEILEGVARLRISNDIEFEEQTFIAKMTEAKERRAKLRATGPTIPMELRVEKSLDAIYVCCFGKDSIEEEDEKLLVIMLNAVFPTVQRPEIKRIIKEKAKKVAEGSEDMEFSTQPQPLSKEAIQSQMKDLEFLKQNSTE*

Click here to download the sequence:
Link to NCBI Protein BLAST