Transcript Information: S_Transcript_202285.p1


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value9E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.59140002744845
Replicate 20.49028421238922
Replicate 31.4344350287245
Condition 2: 8 Hour
Replicate 12.1325390317133
Replicate 20.87001633598937
Replicate 31.0657923802491
Condition 3: 24 Hour
Replicate 10.48544185534654
Replicate 20.37773019293912
Replicate 30.98085728242118


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_202285.p1 GENE.S_Transcript_202285~~S_Transcript_202285.p1 ORF type:5prime_partial len:180 (+),score=13.45,zf-RVT|PF13966.2|1.3e-17,zf-RVT|PF13966.2|1.4e+04 S_Transcript_202285:2-541(+)
ACCAGAAAAATTAAGGATTTTTATGAGATGATGACCACTAATACCACAACAGTTCCTTGGTATCAGCTGGTATGGACAAGTTTTGCTAGGCCACGCACCAAATTTATCTTGTGGCTGCTAATGAATCAGAAATTGGCCACTAGAGATAAGATTGCAAGATGGAATCCTAGTTGTGAACTCATATGCCCTCTGTGCAAACCGGATGATGAAAATTGTGAGCATTTGTTTACTAAATGCGTTTTTACCCAGGAAGTGTTTGATAGAGTGTGGCATGGTCTGCGATGTACTTGGACCCAGGTGAATAATTGGCGACTTTTAGAGGAGAGATGGATTCGAATGAGCAAAGGTAAAACCCCCAAATCCAAATGCCTGAAAGCAGCTCTTGCAGAGTCTTGTTATCATATTTGGTGGGAGAGAAACCAGAGAGTCTTCAATAATCATATGCGGTCCCCTCAGCAGCTAGCTAGAAGTATATTGTTCTTTATTTGTATGAGAGGTCGGGGTAGCAAGGTGATAGCAAAGTATCTTAATGCTATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_202285.p1 GENE.S_Transcript_202285~~S_Transcript_202285.p1 ORF type:5prime_partial len:180 (+),score=13.45,zf-RVT|PF13966.2|1.3e-17,zf-RVT|PF13966.2|1.4e+04 S_Transcript_202285:2-541(+)
TRKIKDFYEMMTTNTTTVPWYQLVWTSFARPRTKFILWLLMNQKLATRDKIARWNPSCELICPLCKPDDENCEHLFTKCVFTQEVFDRVWHGLRCTWTQVNNWRLLEERWIRMSKGKTPKSKCLKAALAESCYHIWWERNQRVFNNHMRSPQQLARSILFFICMRGRGSKVIAKYLNAM*

Click here to download the sequence:
Link to NCBI Protein BLAST