Transcript Information: S_Transcript_202296.p1


Annotated TAIR IDAT3G53230.1
Annotated Gene NameATPase, AAA-type, CDC48 protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19723416-19726489 | Forward length=815
E-Value9E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.268404824729
Replicate 216.273263219727
Replicate 317.78873835014
Condition 2: 8 Hour
Replicate 122.081609831925
Replicate 224.59316694438
Replicate 320.711142708386
Condition 3: 24 Hour
Replicate 116.112538177459
Replicate 218.806141520799
Replicate 317.709095007847


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_202296.p1 GENE.S_Transcript_202296~~S_Transcript_202296.p1 ORF type:5prime_partial len:141 (-),score=22.05 S_Transcript_202296:73-495(-)
CGGTTATGGTATTTATGGAGGAAAAAGGGTGAAAAAGGTAACCCATACATGAGATCAACAACTTCTTTAAAGAATAAGGAAAGCATAAGAGAGATTGAAAAACTTGAAGTTGGCTTTCTCTTCGATTTTGACGCTTATGAATCTTTTAGTTTCTCTTCTGTTTCCAAGCTTCAAATCGAGATAATGACGCTCCTGGTATCTTCATTGTGGCTTAATAAGGCCAGGTGGCTTGCAGTTCCGCATTCAAGACATCAGTGGACAATATGTCCATCTGCAAAGACACCCCATGAGAGCCATTGCAAATTGCATGGAAGTTCAGTTGGATATGCCGGAGGAGCAGAAGACACGGTGTTGGACCAACTGCTGACTGAGATGGATGGGATTAACATCTGTATGAAACCATCATCTAAAGGGTTGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_202296.p1 GENE.S_Transcript_202296~~S_Transcript_202296.p1 ORF type:5prime_partial len:141 (-),score=22.05 S_Transcript_202296:73-495(-)
RLWYLWRKKGEKGNPYMRSTTSLKNKESIREIEKLEVGFLFDFDAYESFSFSSVSKLQIEIMTLLVSSLWLNKARWLAVPHSRHQWTICPSAKTPHESHCKLHGSSVGYAGGAEDTVLDQLLTEMDGINICMKPSSKGLK*

Click here to download the sequence:
Link to NCBI Protein BLAST