Transcript Information: S_Transcript_20271.p1


Annotated TAIR IDAT1G59720.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)CRR28
Annotation TypeOrtholog
Chromosome Positionchr1:21939868-21941784 | Reverse length=638
E-Value1.4E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.40786208789549
Replicate 20.42265880378381
Replicate 30.70661824075098
Condition 2: 8 Hour
Replicate 11.3890100972845
Replicate 20.7714430565423
Replicate 30.49001948517199
Condition 3: 24 Hour
Replicate 10
Replicate 20.52100716267465
Replicate 30.48318092730107


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_20271.p1 GENE.S_Transcript_20271~~S_Transcript_20271.p1 ORF type:complete len:261 (+),score=34.25,PPR_2|PF13041.2|1.4e-06,PPR_2|PF13041.2|0.042,PPR_2|PF13041.2|4.3e-05,PPR|PF01535.16|7.7,PPR|PF01535.16|36,PPR|PF01535.16|0.0051,PPR|PF01535.16|1.4e-05,PPR_1|PF12854.3|5.2,PPR_1|PF12854.3|4.6e+02,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|0.0064,PPR_3|PF13812.2|0.0065,PPR_3|PF13812.2|9.7e+02,PPR_3|PF13812.2|0.33,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.6e+04 S_Transcript_20271:169-951(+)
ATGCTCCTAGCTTCAACAACCACATTTCACCAACCCAATCTTCTCACTTACCTCAACCAATGTTCCTCCATAACCCAATTAAAGCAAATCCATGCCCAAGTAATCCGTACAATCCCAACCGACAACCCAAAAGACCTCCTTTTTCTTCACAGTAGACTTCTCCATTACACCTCCTTCATTGACATTGACTATTCCTTCAAAATTTTCAACCAAATTCATAACCCCAACTCATTTATATGGAATACCCTCATAAGAGCTTGTGCTAGTAGCCCTTCTCACCATAAATCCCTTGCCTTTAAACTCTTTCATGACATGTTGTGCGAGGGTTTTGTTCAACTTGATAAGCACACCTTCCCTTTTGTTCTCAAAGCTTGTGCTTACCTTTTTGCTGAAGATGAAGGGAAACAGGCTCATGCCTATGCTGTGAAACTTGGGTTTGGTTCTGATGTTTATGTTAATAACAGTCTCATCCATTTTTATGGGTCCTGTGGGTATTTGGTTTGTGCACAGAAAGTGTTTGATAAAATGCCTGAGAGAAGTGTTGTGTCATGGAATGTTATGATTGATGTGTTGGTTCAGTTGGGGGAGCTTGATAGGGCGTTGGAATTGTTTGGGCTGATTCAGGGTTTGTTTGAGCCAGATGGGTATAGTTTACAGAGTGTTTTATCTGCTTGTGCTGTAACAGTCTCATCCATTTTTATGGGTCCTGTGGGTTTTTGGATTGTGCACAGAAGGTGTTTGATAAAATGCCTGAGAGAAGTGTTGTGTCATGGAATGTTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_20271.p1 GENE.S_Transcript_20271~~S_Transcript_20271.p1 ORF type:complete len:261 (+),score=34.25,PPR_2|PF13041.2|1.4e-06,PPR_2|PF13041.2|0.042,PPR_2|PF13041.2|4.3e-05,PPR|PF01535.16|7.7,PPR|PF01535.16|36,PPR|PF01535.16|0.0051,PPR|PF01535.16|1.4e-05,PPR_1|PF12854.3|5.2,PPR_1|PF12854.3|4.6e+02,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|0.0064,PPR_3|PF13812.2|0.0065,PPR_3|PF13812.2|9.7e+02,PPR_3|PF13812.2|0.33,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.6e+04 S_Transcript_20271:169-951(+)
MLLASTTTFHQPNLLTYLNQCSSITQLKQIHAQVIRTIPTDNPKDLLFLHSRLLHYTSFIDIDYSFKIFNQIHNPNSFIWNTLIRACASSPSHHKSLAFKLFHDMLCEGFVQLDKHTFPFVLKACAYLFAEDEGKQAHAYAVKLGFGSDVYVNNSLIHFYGSCGYLVCAQKVFDKMPERSVVSWNVMIDVLVQLGELDRALELFGLIQGLFEPDGYSLQSVLSACAVTVSSIFMGPVGFWIVHRRCLIKCLREVLCHGML*

Click here to download the sequence:
Link to NCBI Protein BLAST