Transcript Information: S_Transcript_20274.p1


Annotated TAIR IDAT1G59720.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)CRR28
Annotation TypeOrtholog
Chromosome Positionchr1:21939868-21941784 | Reverse length=638
E-Value1.9E-205
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3271458479194
Replicate 24.5510686979627
Replicate 33.6389255052844
Condition 2: 8 Hour
Replicate 14.877107202573
Replicate 27.4740032451105
Replicate 38.9851554926827
Condition 3: 24 Hour
Replicate 12.6448962073814
Replicate 24.827493497204
Replicate 33.5062034823256


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_20274.p1 GENE.S_Transcript_20274~~S_Transcript_20274.p1 ORF type:complete len:446 (+),score=83.82,DYW_deaminase|PF14432.2|1.1e+04,DYW_deaminase|PF14432.2|2.2e-36,PPR|PF01535.16|0.0021,PPR|PF01535.16|0.00031,PPR|PF01535.16|0.00026,PPR|PF01535.16|0.34,PPR|PF01535.16|0.048,PPR|PF01535.16|16,PPR|PF01535.16|1.2e+03,PPR_2|PF13041.2|0.0038,PPR_2|PF13041.2|0.0018,PPR_2|PF13041.2|8.6e-09,PPR_2|PF13041.2|11,PPR_2|PF13041.2|0.066,PPR_2|PF13041.2|2.7,PPR_1|PF12854.3|16,PPR_1|PF12854.3|0.0037,PPR_1|PF12854.3|0.0029,PPR_1|PF12854.3|27,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|0.12,PPR_3|PF13812.2|1.1e+02,PPR_3|PF13812.2|6.6,PPR_3|PF13812.2|0.00021,PPR_3|PF13812.2|5.3,PPR_3|PF13812.2|41,PPR_3|PF13812.2|4e+02,PPR_3|PF13812.2|4.1e+02 S_Transcript_20274:915-2252(+)
ATGCCTGAGAGAAGTGTTGTGTCATGGAATGTTATGATTGATGTGTTGGTTCAGTTGAGGGAGCTTGTTAGGGCGTTGGAATTGTTTGGGCTGATTCAGGGTTTGTTTGAGCCAGATGGGTATAGTTTACAGAGTGTTTTATCTGCTTGTGCTGTAACAGTCTCATCCATTTTTATGGGTCCTGTGGGTTTTTGGATTGTGCACAGAAGGTGTTTGATAAAATGCCTGAGAGGACTTGGTGCTTTGGGCTCTGGTATGTGGGCTCATGCTTATATTTTGAGAGTTTGTGATGATAATTTGCAAACAGATGTTTTGGTGAACAACTCATTGGTGGAAATGTATTGTAAATGTGGGATGTTAAGTTTGGCTAAGCAGGTCTTTGATGGGATGATTAAGCGCGACGTTAATTCGTGGAATTCGATGATTTTAGGACTAGCTATGCATGGCCATGTTGAGTTGGCAATGGAACATTTTGATCATATGACCAAGGTGGATGGGCTGAGGCCAAATTCGATCACTTTTGTTGGCATTTTGAGTGCTTGCAACCACAGGGGTATGGTTGAATTGGGCCGTGAGTACTTTGATAAGATGGTGAAGGATTATGGAATTGAACCTCGGCTGGAACATTTTGGGTGTATGGTTGATCTTCTTGCTTGTGCGGGATTGGTTGACGAGGCATTAGAACTTGTGTCAAATATGCCTATGAAACCTGATGTCGTGATATGGAGAAGTCTTCTTGATGCTTGCTGTAAGAAAAATGCAGGCATAGAACTAAGTGAAGAAGTAGCAAAGAAGATCCTTGAATCAGAAGCTACCTGTAGTGGTGTTTATGTGCTTCTCTCCAGAGTTTACGCCTCAGCTGCTCGATGGAATGATGTCGGATCAATAAGGAAGTTGATGACTGACAAAGGCATAACTAAAGAACCTGGTTGCAGTTCCTTGGAAATCAATGGAGTCAACCATGAGTTCTTTGCAGGGGACACATCTCACCCTCAAACAAAGGACATTTACCGAGTTTTGGATTTGATAAACGAGAGGCTTCTCTCGGAGGGATATCAGCCTGACCTTTCACAGGCACCCTTAGTTGACGATGAAGATGAGGACCGAAAGCAAGATGCTCTCAGGCTGCATAGTGAGCGACTAGCAATTGCTTTCGGACTTCTACATGTGAAACCAGGCGAACCAATTCGCATATTCAAAAACCTTCGTGTCTGCAGTGACTGCCATGAAGTCACCAAACTGATCTCTAGAATCTTCAATGTTGAGATCATTGTAAGAGATCGAACTCGATTCCATCATTTCAAAGATGGACAGTGTTCATGCTCGGATTACTGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_20274.p1 GENE.S_Transcript_20274~~S_Transcript_20274.p1 ORF type:complete len:446 (+),score=83.82,DYW_deaminase|PF14432.2|1.1e+04,DYW_deaminase|PF14432.2|2.2e-36,PPR|PF01535.16|0.0021,PPR|PF01535.16|0.00031,PPR|PF01535.16|0.00026,PPR|PF01535.16|0.34,PPR|PF01535.16|0.048,PPR|PF01535.16|16,PPR|PF01535.16|1.2e+03,PPR_2|PF13041.2|0.0038,PPR_2|PF13041.2|0.0018,PPR_2|PF13041.2|8.6e-09,PPR_2|PF13041.2|11,PPR_2|PF13041.2|0.066,PPR_2|PF13041.2|2.7,PPR_1|PF12854.3|16,PPR_1|PF12854.3|0.0037,PPR_1|PF12854.3|0.0029,PPR_1|PF12854.3|27,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|0.12,PPR_3|PF13812.2|1.1e+02,PPR_3|PF13812.2|6.6,PPR_3|PF13812.2|0.00021,PPR_3|PF13812.2|5.3,PPR_3|PF13812.2|41,PPR_3|PF13812.2|4e+02,PPR_3|PF13812.2|4.1e+02 S_Transcript_20274:915-2252(+)
MPERSVVSWNVMIDVLVQLRELVRALELFGLIQGLFEPDGYSLQSVLSACAVTVSSIFMGPVGFWIVHRRCLIKCLRGLGALGSGMWAHAYILRVCDDNLQTDVLVNNSLVEMYCKCGMLSLAKQVFDGMIKRDVNSWNSMILGLAMHGHVELAMEHFDHMTKVDGLRPNSITFVGILSACNHRGMVELGREYFDKMVKDYGIEPRLEHFGCMVDLLACAGLVDEALELVSNMPMKPDVVIWRSLLDACCKKNAGIELSEEVAKKILESEATCSGVYVLLSRVYASAARWNDVGSIRKLMTDKGITKEPGCSSLEINGVNHEFFAGDTSHPQTKDIYRVLDLINERLLSEGYQPDLSQAPLVDDEDEDRKQDALRLHSERLAIAFGLLHVKPGEPIRIFKNLRVCSDCHEVTKLISRIFNVEIIVRDRTRFHHFKDGQCSCSDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST