Transcript Information: S_Transcript_203173.p1


Annotated TAIR IDAT5G65380.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26123241-26126352 | Reverse length=486
E-Value6.6E-96
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0384426478011
Replicate 25.7269368638656
Replicate 33.3746283046588
Condition 2: 8 Hour
Replicate 11.4519414684005
Replicate 22.475183253757
Replicate 32.0862318932535
Condition 3: 24 Hour
Replicate 14.276019747095
Replicate 24.8220875694356
Replicate 34.722425335426


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_203173.p1 GENE.S_Transcript_203173~~S_Transcript_203173.p1 ORF type:5prime_partial len:235 (-),score=11.57,MatE|PF01554.14|6.4e-18,MatE|PF01554.14|4.7 S_Transcript_203173:28-732(-)
GGGGCAAAGAAGTACCACATGTTAGGGGTGTATGTGCAACGTTCATGGATAGTCTTGTTCATGTGTGGTATCTTACTATCACCGTTGTACATATTCGCAGCCCCATTTCTGAAGCTTTTGGGTCAGCCACAGGATGTGGCGGAACTCACAGGAAGGGTATCCTTATGGATGCTGCCAATCAACTTTAGCTTCGCCTTCCAATTCCCACTCCAGAGGTTCTTACAATGCCAGCTCAAGACCAGGATCATTGCCTACGTGTCGGTTACCGTTATGTTGATCCATATATTAATAACATGGTTGTTTGTGTCTGTGCTCAAGTGTGGGATTATAGGTGTGGCTATTACCCAGAACTTCTCTTGGTGGTTGTTGGGCGTGGGACTGTTTTGTTACACTGTTTGTGGTGGCTGTCCTATCACTTGGAGTGGTTTCTCTTTGGAAGGCGTTTCTGGACTTTGGGACTTTGTCAAGCTCTCTGCTGCTTCTGGGGTCATGCTCTGCTTGGAGCATTGGTACTACAGAATATTAATTGTGTTGACCGGAAACCTGAAAAATGCGGAGATAGCCGTGGACGCTTTGTCCATATGGTATGACAGTATGATATTGATGTTTCACTCTTCAAGTTTGTCTTGTCGTTTGCTCTCCAGATCCCATCTTGATCAGGGGATATTACTTGTGTTTTTATGGCTCATGTGGACAAATTTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_203173.p1 GENE.S_Transcript_203173~~S_Transcript_203173.p1 ORF type:5prime_partial len:235 (-),score=11.57,MatE|PF01554.14|6.4e-18,MatE|PF01554.14|4.7 S_Transcript_203173:28-732(-)
GAKKYHMLGVYVQRSWIVLFMCGILLSPLYIFAAPFLKLLGQPQDVAELTGRVSLWMLPINFSFAFQFPLQRFLQCQLKTRIIAYVSVTVMLIHILITWLFVSVLKCGIIGVAITQNFSWWLLGVGLFCYTVCGGCPITWSGFSLEGVSGLWDFVKLSAASGVMLCLEHWYYRILIVLTGNLKNAEIAVDALSIWYDSMILMFHSSSLSCRLLSRSHLDQGILLVFLWLMWTNF*

Click here to download the sequence:
Link to NCBI Protein BLAST