Transcript Information: S_Transcript_20333.p1


Annotated TAIR IDAT4G01995.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:873075-874619 | Forward length=258
E-Value9.1E-91
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.542437659167
Replicate 235.463342946475
Replicate 334.966932507498
Condition 2: 8 Hour
Replicate 128.338438139546
Replicate 229.503813810109
Replicate 326.251396211504
Condition 3: 24 Hour
Replicate 149.554165233697
Replicate 241.524970203643
Replicate 339.356545799929


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_20333.p1 GENE.S_Transcript_20333~~S_Transcript_20333.p1 ORF type:5prime_partial len:298 (+),score=59.72,DUF4033|PF13225.2|6.1e-35 S_Transcript_20333:2-895(+)
CCCGGGACTTCATTTAGTGGACCAAAAGAAGTTGCAAAGCTTCTGGAAATTGGAATTATGCAGAGACTTTCTCAACCTCCTCTTCAAACTCCATCCTTCCACTACTCTCTCTCCTCACACACACATCCTCACCTTCATTTCCACTCCAAATCTCTCTCCTCCAAAACACACAAGTTTCGCTTTTCATGTTCTTCCTCTGCTCCACCTGGATCGATAAATAAGGAAGAAAAATTAGAGGCCAGAAAAGAATACCAGCCTAATTTCCTTGATGATGTGTTTCTCAATACCTTCAGGACCAAACTGGTAGAGGAAGTGGGTTGGGATTCAGAGAAGCCTGGCTATGATGGGTTGATTGAAGTTGTTAATCAGCTTATGGTTGGCAGGAGTAATTTCCAGATTAATGAAATTGCCGTTCGGACATTGAAATCTCTATTTCCCCCCTACCTGCTCGAATTATATCGAATGCTTATAAATCCTATAGGAGGAGGGAAACCTTCAGCTATGTTGGTTGCAAGGGTAACAGCAGTTACTTGTCAATGGCTCATGGGACCTTGCTCTGTTAACTCAATCTCTCTTCCTGATGGATCCTCTTGCAAAAGTGGGGTCTTTGTGGAGAGATGCAAGTACTTGGAGGAAAGCAAATGTGCAGGAATATGTGTTAATACTTGCAAGTTCCCGACACAGGCCTTCTTTAAGGATGAAATGGGGGTTCCACTGTACATGGAGCCAAACTTTAGCGATTATAGCTGTCAGTTCAACTTTGGGGTTTCTCCTCCTTCCCCAGAAAATGATAGCATCCTAAAAGAACCATGTTTGGAGATTTGCCCAAATGCCTCTCGACGAAGGAACAACATGAGCAGCATGTCTAGTCCAGAACATTGTCCCAAGTTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_20333.p1 GENE.S_Transcript_20333~~S_Transcript_20333.p1 ORF type:5prime_partial len:298 (+),score=59.72,DUF4033|PF13225.2|6.1e-35 S_Transcript_20333:2-895(+)
PGTSFSGPKEVAKLLEIGIMQRLSQPPLQTPSFHYSLSSHTHPHLHFHSKSLSSKTHKFRFSCSSSAPPGSINKEEKLEARKEYQPNFLDDVFLNTFRTKLVEEVGWDSEKPGYDGLIEVVNQLMVGRSNFQINEIAVRTLKSLFPPYLLELYRMLINPIGGGKPSAMLVARVTAVTCQWLMGPCSVNSISLPDGSSCKSGVFVERCKYLEESKCAGICVNTCKFPTQAFFKDEMGVPLYMEPNFSDYSCQFNFGVSPPSPENDSILKEPCLEICPNASRRRNNMSSMSSPEHCPKL*

Click here to download the sequence:
Link to NCBI Protein BLAST