Transcript Information: S_Transcript_203339.p1


Annotated TAIR IDAT1G49870.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 6518 Blast hits to 5022 proteins in 522 species: Archae - 49; Bacteria - 635; Metazoa - 3264; Fungi - 379; Plants - 242; Viruses - 9; Other Eukaryotes - 1940 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:18460345-18463557 | Forward length=828
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.4472773316837
Replicate 20.37080318584059
Replicate 30.15498097549244
Condition 2: 8 Hour
Replicate 10.53761488194453
Replicate 20.18799872806493
Replicate 30.8956238489488
Condition 3: 24 Hour
Replicate 10
Replicate 20.5713565943617
Replicate 30.84779981193668


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_203339.p1 GENE.S_Transcript_203339~~S_Transcript_203339.p1 ORF type:5prime_partial len:119 (+),score=17.41 S_Transcript_203339:3-359(+)
GCTAGAATCGCTAGGAAGGCCGAGACCAGTACTACAGGTGGAGATGACAAACAAGTTTCTGTTGATCATGTATTAGACTTGGGAAGTGTGCTAGTAAAACATTCGTCAAAACTTGAGAAAGAGATCGAAGAAGCAGAAAAAAACCAGAACTCATCGGAAATGGATGGCTGTAAGCTAGGAGGAAGAATGCATAAACATGGCAAAAAAGACAATTCAAACAAGAGGATGAATTTCCTGTCACTTGTGCCCTCTTGTTTGCTGCAAATGTCTAGCCTAATAATTTTTCATGCTTACAGTGTTCTAGTGGTTTTGTTGCTTGGCTGTAGGGAGTTGTTTTCTTATCATGTCCGGCCGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_203339.p1 GENE.S_Transcript_203339~~S_Transcript_203339.p1 ORF type:5prime_partial len:119 (+),score=17.41 S_Transcript_203339:3-359(+)
ARIARKAETSTTGGDDKQVSVDHVLDLGSVLVKHSSKLEKEIEEAEKNQNSSEMDGCKLGGRMHKHGKKDNSNKRMNFLSLVPSCLLQMSSLIIFHAYSVLVVLLLGCRELFSYHVRP*

Click here to download the sequence:
Link to NCBI Protein BLAST