Transcript Information: S_Transcript_203341.p1


Annotated TAIR IDAT5G57370.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1777 (InterPro:IPR013957); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23244811-23245470 | Forward length=219
E-Value2.3E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1088750514659
Replicate 21.1031394778757
Replicate 31.5368946736334
Condition 2: 8 Hour
Replicate 11.599404273785
Replicate 21.4914565759818
Replicate 33.1973771407472
Condition 3: 24 Hour
Replicate 12.3665290448144
Replicate 22.4552462541043
Replicate 31.0509185168798


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_203341.p1 GENE.S_Transcript_203341~~S_Transcript_203341.p1 ORF type:3prime_partial len:120 (+),score=31.98,PRP38_assoc|PF12871.3|8.8e-07 S_Transcript_203341:195-551(+)
ATGAAAAGGCCGTTTGAAGACATTGCAGAGGCGGCTGCCAATGCTTCTAATACTAATAATAACATTCCAAAGCCTGTGTTCTTGACTAAAGCCCAAAGAGAGCAAATAGCTCTTCAGAAAAGGCAAGAAGAAGTTGCTGAACAGAAGCGTCGAGCCGAGCAGCTTCTTCGAGGTCTTTCTGATAACAACAACAACAACAAATCATCCTCTTCTGATTCTCCTCATCATCGGTCTTCCCGTGACTATGACCGGGATCGTGATCGGGATCGGGATAGGGATAGGGATCGGGACCGGGATCGCAACCGTGACCGAGAGAGGGATCGGGACCGTGACAGAGAGAGGGATCGGGATCGGGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_203341.p1 GENE.S_Transcript_203341~~S_Transcript_203341.p1 ORF type:3prime_partial len:120 (+),score=31.98,PRP38_assoc|PF12871.3|8.8e-07 S_Transcript_203341:195-551(+)
MKRPFEDIAEAAANASNTNNNIPKPVFLTKAQREQIALQKRQEEVAEQKRRAEQLLRGLSDNNNNNKSSSSDSPHHRSSRDYDRDRDRDRDRDRDRDRDRNRDRERDRDRDRERDRDRD

Click here to download the sequence:
Link to NCBI Protein BLAST