Transcript Information: S_Transcript_203520.p1


Annotated TAIR IDAT2G31270.1
Annotated Gene NameHomolog of yeast CDT1 A
Annotated Gene Symbol(s)ATCDT1A, CDT1A, CDT1
Annotation TypeHomolog
Chromosome Positionchr2:13329037-13331544 | Forward length=571
E-Value4E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.054680242422
Replicate 21.2166979535394
Replicate 31.152671005225
Condition 2: 8 Hour
Replicate 10.94082604340293
Replicate 21.3982405399829
Replicate 31.8808100827925
Condition 3: 24 Hour
Replicate 10.84327675239426
Replicate 20.74990553009973
Replicate 30.41727646993758


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_203520.p1 GENE.S_Transcript_203520~~S_Transcript_203520.p1 ORF type:5prime_partial len:544 (+),score=102.77,CDT1_C|PF16679.1|4.6e-14,CDT1|PF08839.7|1.8e-13,CDT1|PF08839.7|4.7e+02 S_Transcript_203520:1-1632(+)
ATTAGAAAGAGAGTATTGCCGGAACCAGATTTCTCTCTCAAACTCAGGAAACATAACTTTGTAACCTCCCGAACTTCCAGTCTACAAATCCATTTGATGGAGCCATTACCATCACCGACTGATTCACCGACATCACCTGATAAAAGTAAAACTCCATCGGAGCTGAAATCTCATCCGTCAGATCAAACCAGCAACGATTGCCCTTCATGGGCAACTACAACTCCAATGAAGAAGGTCCCACAACTCCGTCCAAGAAATAAATACCATCGTCACTCTCAATTGCCCCCCAAGTATGAGATGTTATTGAGGTTTTTCGAAGCAATGGATGCGTCTTTGAAGTTGCTTCGCTTGAGAAAGTCAATGCCCATCTTCACCACCAAGATTAAGCCCATGATTGAGAAGATCTCTGAGAGGTGCTTCACTCATCAACATTTGGCTCAATTGAAGTATCTTTTGCCCAAGGAGATGGGAGTTAAAAGGGTCTTGTTGCCTGATGAGGAGACACGCTGCATGCAATATGATCTTCATGTTTCATTGAATGTTAATATGATGATTGATACAAAGAAAAGGAAACGAGAGGGTAAACAATCCTGTTTGAAGGACTACTTCCTCTCACGGCTTTGGAAGTTCATTGGAACCCACCCTGAGGGAGCTGAAGTACCCGAGGAAGAATTGCCGGAGCCATTTAACAGGAAGCAAGATACAGTTCTGAATACCACCAAGCATTCACACTCATTTTCACATGTCGGAAAAGGCTGTGACAGAATTATAGAGCCGCAGCCACCACAAGCATCACATTTCTCTGTATCTTTTAAGAAGCATTTTTCAAAGGGAAAGGTGGGCGTTGAAACAGGGAGCAGTCTTCAGACTCCATCCAAGTCCTCACTTAAATCACCGCGAGCTTATGTTTCAGAGCCTTCCATGAATGAAGATGTATTGGAATCTGATGTTCCATCTGCGAGAGTACTATCTAATCGATCTGTAGTGCAAACCAAGCAGAAGCCTTTCGCAGACTATGAAACTTGCTCTCCACAAAATGACCACTCAAAGGCAACAACACCTGTGAAATCAGCTGGAACTCCAATCTTTATGGCCAGCACACCAGGGTTGAAGACACCCAAGAGGTGTAGGATGAGTCCAGATGATAAATATGCCAGCTCACCAGATAAAGTGGTCAAACGCCCTTCTTGTGCTAGGTCACTGCAATTTGATGGTCTCTCGAGGGATGTAAACATTGAGCTTCAACTAGATGAGACTGACTGCTCTAAGATTCTTGACATTCTTCCTTCCAATCTCCTGCAATCGCTAAAGGAGAAGGAAGATAAAAGAATAGAGCAATCAAATAGGAAACAGATGATTGCTAGGCTTCCTAAGCTGTTTGACAGAATGCATTACTTGTTTCAGAGCCCTAAGAACTCAGTTATTAGAAAAGAAGCGCTAATACGTGACCTAACGGAGTGCCATTCTGACATAACTGATCAGAGTGAGGTTGAGGAGCAGCTGAAACTTCTGCAAGAAATAATTCCCGAGTGGATTTTTCACAAATTATCACCTTCTGGAAACACCTTCTATGGCATCAACAAGGAATTAAATCCCAACACTATGCGGCTCAGACTTGAAAAAGCTATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_203520.p1 GENE.S_Transcript_203520~~S_Transcript_203520.p1 ORF type:5prime_partial len:544 (+),score=102.77,CDT1_C|PF16679.1|4.6e-14,CDT1|PF08839.7|1.8e-13,CDT1|PF08839.7|4.7e+02 S_Transcript_203520:1-1632(+)
IRKRVLPEPDFSLKLRKHNFVTSRTSSLQIHLMEPLPSPTDSPTSPDKSKTPSELKSHPSDQTSNDCPSWATTTPMKKVPQLRPRNKYHRHSQLPPKYEMLLRFFEAMDASLKLLRLRKSMPIFTTKIKPMIEKISERCFTHQHLAQLKYLLPKEMGVKRVLLPDEETRCMQYDLHVSLNVNMMIDTKKRKREGKQSCLKDYFLSRLWKFIGTHPEGAEVPEEELPEPFNRKQDTVLNTTKHSHSFSHVGKGCDRIIEPQPPQASHFSVSFKKHFSKGKVGVETGSSLQTPSKSSLKSPRAYVSEPSMNEDVLESDVPSARVLSNRSVVQTKQKPFADYETCSPQNDHSKATTPVKSAGTPIFMASTPGLKTPKRCRMSPDDKYASSPDKVVKRPSCARSLQFDGLSRDVNIELQLDETDCSKILDILPSNLLQSLKEKEDKRIEQSNRKQMIARLPKLFDRMHYLFQSPKNSVIRKEALIRDLTECHSDITDQSEVEEQLKLLQEIIPEWIFHKLSPSGNTFYGINKELNPNTMRLRLEKAM*

Click here to download the sequence:
Link to NCBI Protein BLAST