Transcript Information: S_Transcript_203546.p1


Annotated TAIR IDAT3G24820.1
Annotated Gene NameBSD domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:9062717-9064366 | Reverse length=186
E-Value9E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.1406647420399
Replicate 22.8777551596758
Replicate 31.2600627137864
Condition 2: 8 Hour
Replicate 14.2385868953308
Replicate 27.3646458255001
Replicate 34.6338799141264
Condition 3: 24 Hour
Replicate 12.4422851107497
Replicate 24.3638394960669
Replicate 32.8198558962242


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_203546.p1 GENE.S_Transcript_203546~~S_Transcript_203546.p1 ORF type:5prime_partial len:161 (-),score=22.06,BSD|PF03909.13|1.4e-12 S_Transcript_203546:46-528(-)
AACAAAGAGGATACTCAGAACCTGGGAAATTCCCACAAGAATAAAGCAATTAGAAAAGAACAAGAAGAAGAATTTTATGGGGTTACAGATCAGTTGGTTGAATTCATAAAGTCCTTCACTATAGATACCTTCAAGAATTGCGCTCCCCCAGATGAGGAAATTGATGGGACTCAAACGACTTCAGGTGGAGTGAGGGTGGATTTGTCTGAGTGGCAACAACAGCATGCTGTCATTATTCTCTCTAAAGTCAAGGAACTGTCACAATTAAGATACACCTTATGTCCTCGCCACTTGAAGGAACGGCAATTCTGGAGAATATACTTCACACTTGTTAAAAGCTATGCGACTGAGTACGAGCTGCGGGCCATACAACTTGATAAACTCAGAAGGATGGCACTAGGGAACGAGACACGTTCAGATACGAATGGCATTGAGCTTGAAATGACGGAGTCGAAGCAGACAAGTAACACTGCACCGTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_203546.p1 GENE.S_Transcript_203546~~S_Transcript_203546.p1 ORF type:5prime_partial len:161 (-),score=22.06,BSD|PF03909.13|1.4e-12 S_Transcript_203546:46-528(-)
NKEDTQNLGNSHKNKAIRKEQEEEFYGVTDQLVEFIKSFTIDTFKNCAPPDEEIDGTQTTSGGVRVDLSEWQQQHAVIILSKVKELSQLRYTLCPRHLKERQFWRIYFTLVKSYATEYELRAIQLDKLRRMALGNETRSDTNGIELEMTESKQTSNTAPS*

Click here to download the sequence:
Link to NCBI Protein BLAST