Transcript Information: S_Transcript_203633.p1


Annotated TAIR IDAT5G24880.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: calmodulin-binding protein-related (TAIR:AT5G10660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:8552743-8554074 | Forward length=443
E-Value1E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3393851825145
Replicate 21.4000457268445
Replicate 31.4528194726688
Condition 2: 8 Hour
Replicate 10.83994972802712
Replicate 20.58744460323133
Replicate 31.7257907251298
Condition 3: 24 Hour
Replicate 11.0038130269201
Replicate 20.644703611581
Replicate 30.88304750652485


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_203633.p1 GENE.S_Transcript_203633~~S_Transcript_203633.p1 ORF type:complete len:457 (+),score=135.41,CaM_binding|PF07839.7|3.4e+03,CaM_binding|PF07839.7|1.7e+03,CaM_binding|PF07839.7|2.8e+03,CaM_binding|PF07839.7|6.8e-10 S_Transcript_203633:242-1612(+)
ATGGCAACAACAATAAGGGGAGGTGGTGCTGGGAAGGAAAAGAGGGGCACATCCCCTTCAAGTTCTGTCATAAAGAAATCAAACAAGCCCTTGTCATCTACCCCAACCTCTTCTTCTCATGGTGATGAAAAAATCAGCTCACCTACAGAAGGAAAATCATCAGTCCCAAACTATCTTAGACCCACCATAAGCTCCAAGAAAGTCCTCACTGAGTCATCCACTCAGAAACCAGTCCTCAATAGGAGGCGATCCTTTGATCGTCCCCCTCCCTCCTCCCAAGTACAAAAGGCCATTCGCGGTGTTTCTTCTGTACGTGACAACAAACCTTTACGTTCATCCTCCTTCTCGAGCAAATCAATCACTAGTGTCACCCCCCATGCCTCTTCCCATACAAGACCGGCCTCCTCAGAGAGGCCGTCTGTAAGGAAAGATATGAAGGGGGAGTCTCATTTGTCAAAGTCTAAGTCGACTTTGAAGAGAAACACATTGTCCTCTACAAGTACAAAAAAGGAAACTAGTGCTGCTTCATCTTCATCATCATCATCGAGATTAGGGAAGGCTAAGAAGGCACCAAAGAGTGTGACCTCAGAAACCTCGAGTGTTGACAATTGTGACAGTCACTCAGTTGATCAATTGGTTATTGAGGATGATATGGTGAATATTGATCACGAGGTTGAGTCACTCCCCGAGATATCAGAGATGCCTGATAGTAGCAAGGAGCTCGGAGACCCTACTAACTTAATAGTCGAAGGGGATCACAAGGATGTTGTCAGTCCTAAGGAAGAGGATCATGATCAAGAGGTGAATTCTCCAATGGCTGCTGATCAGGTTTCTGCAGAGTCTGCAACACAGGAGGTCAGAGCCTCTGAACACCACCATGAAGCGAAAGAAGAGGTGAAAGATCCATATCAGGAGAGCGTTGGAGATTCGGGTGATCATCAGCCTGAAATCGAGACTGCAGAACAGAATCAGACAGGGGAGATCAGTGCAGGTAACGAGGAAGGGGTTGATCAAGACGCGACAAAGGTGGACACCACTGAAACTGAGGAAAAGAAAGAAAGTGAGTCGTCAGAGAAAGAGGGGGGTGACGAGACAGTTAGGGAAGATGAATCAGAAGCTAAGGATGAAAAAGAAAAAGAAATGGAAAAGGAAACACAGAATGTTGTAAGTCCTCCTGCTGCAAGTTCTGCACCTGCAACTGTATCTGCACCTGTGAAAGCGCAAACTCCTGCAGGGAAGAAAGAAAATGCAGCCTACAATGATGTGATTGAAGAAACCGCGACTAAGCTGATGAGCAGGAAGAACAAGGTGCTTGCACTTGCCGGAGCTTTTGAAACCGTCATCTCCTTGCAAGACACCAGCAAGAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_203633.p1 GENE.S_Transcript_203633~~S_Transcript_203633.p1 ORF type:complete len:457 (+),score=135.41,CaM_binding|PF07839.7|3.4e+03,CaM_binding|PF07839.7|1.7e+03,CaM_binding|PF07839.7|2.8e+03,CaM_binding|PF07839.7|6.8e-10 S_Transcript_203633:242-1612(+)
MATTIRGGGAGKEKRGTSPSSSVIKKSNKPLSSTPTSSSHGDEKISSPTEGKSSVPNYLRPTISSKKVLTESSTQKPVLNRRRSFDRPPPSSQVQKAIRGVSSVRDNKPLRSSSFSSKSITSVTPHASSHTRPASSERPSVRKDMKGESHLSKSKSTLKRNTLSSTSTKKETSAASSSSSSSRLGKAKKAPKSVTSETSSVDNCDSHSVDQLVIEDDMVNIDHEVESLPEISEMPDSSKELGDPTNLIVEGDHKDVVSPKEEDHDQEVNSPMAADQVSAESATQEVRASEHHHEAKEEVKDPYQESVGDSGDHQPEIETAEQNQTGEISAGNEEGVDQDATKVDTTETEEKKESESSEKEGGDETVREDESEAKDEKEKEMEKETQNVVSPPAASSAPATVSAPVKAQTPAGKKENAAYNDVIEETATKLMSRKNKVLALAGAFETVISLQDTSKN*

Click here to download the sequence:
Link to NCBI Protein BLAST