Transcript Information: S_Transcript_203799.p1


Annotated TAIR IDAT5G37055.1
Annotated Gene NameHIT-type Zinc finger family protein
Annotated Gene Symbol(s)ATSWC6, SEF
Annotation TypeOrtholog
Chromosome Positionchr5:14641634-14642387 | Reverse length=171
E-Value3.1E-84
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.012880424847
Replicate 221.175206069569
Replicate 321.092554486417
Condition 2: 8 Hour
Replicate 126.105219181318
Replicate 226.871933136223
Replicate 324.378469387306
Condition 3: 24 Hour
Replicate 115.693163427151
Replicate 217.193236368263
Replicate 315.220199209984


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_203799.p1 GENE.S_Transcript_203799~~S_Transcript_203799.p1 ORF type:complete len:174 (+),score=18.63,zf-HIT|PF04438.12|6.1e-09 S_Transcript_203799:236-757(+)
ATGGAGGACGATAACTCCGGTTCACTCCGGCGAATGTCGACGCGATCCCGTAGGGTCGCCCCTAAAATGGCTGCTGCTCTTGCCAGCTCGGATAATCGCACACAGGCGGCATTAGCACGGCTTGAAGCTCTGGAAAACGACAATGCAGGAATAGAAACAGTTGAGATCAATGATGATGACGAGGCCTCTCTTGATGATGACGATGATGAAGCTTATATACAGAGGAAGCATTCCATGAGTAAGCGGAAAACCCGGCAGGCAAAGGCTCGCGAAAATGCCAGAAAAGCTCCGAGAACATTTCTAGAGCTTGTGCACGAGGCGAATTTAGAATCCTTGCCTCCTCATGTGCCCAGTTATTTGAGGGCGGCTGTAGGACCTCCGAGCTCTACAACACGGCGCAATTTCTGCACAGTTTGTGGGTTTTCCGCCAATTATACATGCGTGAGATGTGGTGTGCGTTTCTGCTGTATCCGATGCCAGAACATACACAATGATACCCGGTGTTTGAAATTCGTTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_203799.p1 GENE.S_Transcript_203799~~S_Transcript_203799.p1 ORF type:complete len:174 (+),score=18.63,zf-HIT|PF04438.12|6.1e-09 S_Transcript_203799:236-757(+)
MEDDNSGSLRRMSTRSRRVAPKMAAALASSDNRTQAALARLEALENDNAGIETVEINDDDEASLDDDDDEAYIQRKHSMSKRKTRQAKARENARKAPRTFLELVHEANLESLPPHVPSYLRAAVGPPSSTTRRNFCTVCGFSANYTCVRCGVRFCCIRCQNIHNDTRCLKFVA*

Click here to download the sequence:
Link to NCBI Protein BLAST