Transcript Information: S_Transcript_203872.p1


Annotated TAIR IDAT1G71770.1
Annotated Gene Namepoly(A)-binding protein 5
Annotated Gene Symbol(s)PAB5
Annotation TypeHomolog
Chromosome Positionchr1:26990777-26993489 | Reverse length=682
E-Value8E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.88464270033841
Replicate 20.55004184492419
Replicate 30.66414285065598
Condition 2: 8 Hour
Replicate 10.41351172360092
Replicate 20.74366255866127
Replicate 30.41332668486113
Condition 3: 24 Hour
Replicate 10.12102428526645
Replicate 20.69058705634299
Replicate 31.1178745442711


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_203872.p1 GENE.S_Transcript_203872~~S_Transcript_203872.p1 ORF type:5prime_partial len:361 (+),score=96.89,PABP|PF00658.14|2.2e+03,PABP|PF00658.14|5.7e-26,RRM_1|PF00076.18|1.3e-20,RRM_6|PF14259.2|8.6e-14,RRM_5|PF13893.2|5.5e-08,RRM_5|PF13893.2|1.1e+04 S_Transcript_203872:2-1084(+)
TGGTATGTAGGAAGGGCTCAGAGAAAAGCAGAGAGGAGAGCAAAGTTGAAATCCAAATTTGAACAAGAAAGGATCAGTCATTACGAAAAGTTAAAGGGTGCCAATTTGTATTTGAAAAATCTTGATGACAGCATCAATGATGAGAAGCTGAATGAATTGTTTTCCGAGTTTGGAACTATAAAATCACTTAAGATCATGCTTGATCAACATGGAGTAAGCAAAGGATCTGGTTTTGTTTCATTCTCAACCCCAGAGGAAGCCGCAAGAGCAATAAATGAAATGCACGGTAAGATGATTGGAAAAAAGCCTCTTTATGTTGTTGTCGCTGAACGTAAAGAAGAAAGGAAGGCAAGACTACAGGCTCATTTTGCTCAGGTTCGAGCTCAAGGAGGGATGTCACCTTTGCCCTCAGTGATGCCTGGCTTCCATCCTGGAGCACCCAGGCTTGCACCACAGCAGCTCTTCTTCGGCCAAGGTGCTCCCGGTTTGCTTCACCCTCTGCCTGCAGGATATGGCTTTCAGCAACATATCTTGCCTGGGGTCCGTCCTGCAGGCCCGAACTTTATGATGCCTTACCACCTTCGAAGGCAAGGACAAACTGGACCACGTTTTGGTGGCAGGAGAGGTGGAAATAACTTGCAGCAACATCAGCAGGTGTCAAATCGCAATGGTGGTCAGAATTTCAGATACATGGGTGCCAGGCGCAATGGTATAGATTCCTCTGTGGTCCCTCAAGGACTGATGGGAACAGTAATGCCAGTTCACTTGAATGCAGGAGAAACGGGCAAATCTGGTCCACTATCAATGTCAACACTTGCATCTGCTCTGGCTGCTGCATCTCCAGAGAGCCAAAGAGTGATGCTTGGGGAACAACTGTATCCATTGGTGGAGCGTATCAAGCATGCTAATGCAGGAAAAGTGACTGGCATGCTGCTAGAGATGGATCAGACCGAAGTACTGCACCTCATTGAGGCTCCTGATGCTCTAAAGAAGAAAGTTACTGAGGCCATGAATGTTCTCCACTCTACTCCCTTAGCTTCTGATGTTGGTGACCAGCTTGGAGCTTTGCCGCTGGCTGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_203872.p1 GENE.S_Transcript_203872~~S_Transcript_203872.p1 ORF type:5prime_partial len:361 (+),score=96.89,PABP|PF00658.14|2.2e+03,PABP|PF00658.14|5.7e-26,RRM_1|PF00076.18|1.3e-20,RRM_6|PF14259.2|8.6e-14,RRM_5|PF13893.2|5.5e-08,RRM_5|PF13893.2|1.1e+04 S_Transcript_203872:2-1084(+)
WYVGRAQRKAERRAKLKSKFEQERISHYEKLKGANLYLKNLDDSINDEKLNELFSEFGTIKSLKIMLDQHGVSKGSGFVSFSTPEEAARAINEMHGKMIGKKPLYVVVAERKEERKARLQAHFAQVRAQGGMSPLPSVMPGFHPGAPRLAPQQLFFGQGAPGLLHPLPAGYGFQQHILPGVRPAGPNFMMPYHLRRQGQTGPRFGGRRGGNNLQQHQQVSNRNGGQNFRYMGARRNGIDSSVVPQGLMGTVMPVHLNAGETGKSGPLSMSTLASALAAASPESQRVMLGEQLYPLVERIKHANAGKVTGMLLEMDQTEVLHLIEAPDALKKKVTEAMNVLHSTPLASDVGDQLGALPLAD*

Click here to download the sequence:
Link to NCBI Protein BLAST