Transcript Information: S_Transcript_20390.p1


Annotated TAIR IDAT3G09770.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:2996402-2997835 | Reverse length=388
E-Value1.8E-160
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 160.979396531004
Replicate 258.776197902566
Replicate 354.892553067724
Condition 2: 8 Hour
Replicate 162.744783584006
Replicate 260.128013141942
Replicate 353.988957844638
Condition 3: 24 Hour
Replicate 160.259770468804
Replicate 256.986696824516
Replicate 357.328846338138


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_20390.p1 GENE.S_Transcript_20390~~S_Transcript_20390.p1 ORF type:complete len:381 (+),score=79.17,zf-C3HC4_3|PF13920.2|6e-16,zf-C3HC4_2|PF13923.2|5.1e-07,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|8.9e-06 S_Transcript_20390:374-1516(+)
ATGGGTAACATTAACAGCGGTGGGGGTGGCGGTGGAGGTGGCCGGCGTAGACAAGGAAGCCGGCGAAGCCACCCAACTCCACCGCCGCCGCAACAACCGCAACCGGAGATCAGGGCCAACAGCTATGTTTTCGCTGCTGCGACCCCGTACCCAGCTCCTTACCCGAATCCGTCATCAGGGTATTACCACCATTTCCACCACCACCCGCCAGCTGGGTACTATGTTCCACCACCACCTCCACCGCCACCGTCTGCAACGATGCCAATGCCTCTACCTGCCCCGTATGACCACCATCACCAAGCCCCCAATTGGGCTGATGCCGCTGCTGGAAGGTACCCTGTTGTTGGGCCTCCAGTGATGGGCCCACCTGCCCCTTATGTTGAACATCAGAAGGCTGTCACTATAAGGAATGATGTCAATTTGAAGAAAGAGACTCTGCGGGTTGAGCCTGATGATGAGAATCCTGGCAAATTCCTTGTTACTTTCATCTTTGATGCTACGGTTGCTGGAAGCATTACTCTAATCTTCTTTGCAAAAGAAGGTGAAGATTGCAAACTTACCCCAACGAAGGAAACCTTACTTCCTCCCATTACAGTACATTTCGAGCAAGGCCTAGGCCAAAAGTTTAAACAACCATCAGGAACTGGCCTTGACTTTTCAATGTTTGAGGAATTTGATCTTCTGAAAGATGATAATGTGGGTGTATATCATCTAGCAGTGAAAGCTGATGCGTGCCCTATCAACCAGACAGAGACAGCTTCAGATGGAAGTCCTGTTCCAGGCATCACAAACTCTCAGATAACTCAAGCATTATTTGAGAAAGACAAAGGGGAGTATAAAGTAAAGGTGCTTAAGCAGATCTTATGGGTGAATGGTATGAGATATGAGCTGCAGGAGATCTATGGAATAGGCAACTCTGTGGAGGGTGAGTTTGAAGGTAACGACCCAGGAAAAGAATGTGTCATCTGCTTATCAGAGCCTAGGGATACAACAGTCCTCCCATGTCGGCACATGTGTATGTGTAGTGGTTGTGCAAAAGTTTTAAGGTTTCAGACAAACCGGTGCCCCATATGCCGGCAACCAGTTGAAAGACTTCTGGAGATAAAAGTCAACAACGGGGAAGAAGAAGAGAAAAATAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_20390.p1 GENE.S_Transcript_20390~~S_Transcript_20390.p1 ORF type:complete len:381 (+),score=79.17,zf-C3HC4_3|PF13920.2|6e-16,zf-C3HC4_2|PF13923.2|5.1e-07,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|8.9e-06 S_Transcript_20390:374-1516(+)
MGNINSGGGGGGGGRRRQGSRRSHPTPPPPQQPQPEIRANSYVFAAATPYPAPYPNPSSGYYHHFHHHPPAGYYVPPPPPPPPSATMPMPLPAPYDHHHQAPNWADAAAGRYPVVGPPVMGPPAPYVEHQKAVTIRNDVNLKKETLRVEPDDENPGKFLVTFIFDATVAGSITLIFFAKEGEDCKLTPTKETLLPPITVHFEQGLGQKFKQPSGTGLDFSMFEEFDLLKDDNVGVYHLAVKADACPINQTETASDGSPVPGITNSQITQALFEKDKGEYKVKVLKQILWVNGMRYELQEIYGIGNSVEGEFEGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIKVNNGEEEEKNS*

Click here to download the sequence:
Link to NCBI Protein BLAST