Transcript Information: S_Transcript_20401.p1


Annotated TAIR IDAT4G24900.1
Annotated Gene Nameunknown protein; Has 119 Blast hits to 96 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 81; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:12814867-12817388 | Forward length=421
E-Value5E-112
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6290456229792
Replicate 23.6293766371669
Replicate 34.8302404028478
Condition 2: 8 Hour
Replicate 14.6620442035291
Replicate 25.5687502025294
Replicate 34.8906490175931
Condition 3: 24 Hour
Replicate 13.498964022303
Replicate 24.8074751828616
Replicate 34.0944877281033


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_20401.p1 GENE.S_Transcript_20401~~S_Transcript_20401.p1 ORF type:5prime_partial len:462 (+),score=94.48,CCDC84|PF14968.2|2.3e-106 S_Transcript_20401:1-1386(+)
AGAAAGAGAAAGAGAAAGAGAAAGAGAAAGAGAAATAAGAAGATGAACAAGAAGAAGACTGGTCCGAAAACAAACGAGAAATCAGAGTTCCAATTCTGCACAGTTTGTCGAATCAATCACAATCAAGGTCGTCGCCATAACTTCTTTCCTCGCCATACCAATTCTCTCTCCTCTCTCTTTGGTCGCTTCCAAAGCAAGCTTTCTAACGTCAAATCCTCTCTCAAAAACCCTAGCCTTGCACTTCCTTCTAAATTAACACCTTCTTCTAATCGGTTTTGGTGTATTTTCTGTGATTCCGACATTGATGAGCTTGGTAGCGCTTTCACCAGTGGTAAAGCGATCGAGCATTTAGCGAGCGAGGATCATTTGAGGAATTTGAAGCAATTTTTGTGGAAGTATGGTGGTGGAATGGACAAGGTTGATTCATTCAGAATTACAGAGGCTGAGTTCATCAAGTGGGAGAAGAGATGCAAACTATTGAAAAACGAAGCTGGCTTATCAAATGGACCCTTACACGGACAGTCAAATGATATCCAACCAAATTATAAAATGATGAATAGTTTTGACAAAAATAGTATGCACTTTCTTGAATCAACTCTCTCAAAAGATGTTATGCCTTTACAATATGACACGAATGAGAATTACCAGGTATATTATTCAGATATTTCAAAAGCCAACAAAGTCGGTCCTCTCCAACAAGCTGTTGCATCACCCACACCTTTGGCGTCACAACCTGGCGTTTACAATTGGAATTCCACTTATATGAGTCAGAATAGTCAACATTCTCTGCTTTCTACTGGTAAAGACCTCTTGGTTGGTGGCTTTGTAAGTTCAGAGGTTCATAATAATCAAAGCATGGCTAATAGGCGAGCTATTACTGAGGGTTACCAGAATCTCACTCAAATTTCTTCTGGGGTTCCAGAGGATGGGAAAGGAAATGTTCATTCTGGGGCATCTCCTCCTTGGCTGGAAGGAATTGAAGCACATGGAAAACATGAACCACCCGGTGATCCCAGAGTGAATACCATTCAAAAGACTAGTAAAAAGGCTAGTAAATTGAACCCAAAGAGGGTTGGGGCTGCATGGGCTGAGAAGAGGAAACTAGAAATGGAAATGGAGAAGCGAGGAGAAATAGTGCGCAATAATTCTGATGCTGACTGGCTTCCTAATTTTGGTAGGGTTTGGCAGTCAGGTACCCGTAAAGAATCCATGAAAGAATTTAAGAAGGAAAAGTTATACCCCCCTGTTGCAAGTCAAGCTGAGACTGAAATCAAGCTACAGCCTTATATCAGCAAACGAATGGAACATTTCCTGCTGCACCTGCAGCGACGAGACATGGATGAAATATCCTCTGAGGGTGTTCAAAAAAATGGTGGTATCTCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_20401.p1 GENE.S_Transcript_20401~~S_Transcript_20401.p1 ORF type:5prime_partial len:462 (+),score=94.48,CCDC84|PF14968.2|2.3e-106 S_Transcript_20401:1-1386(+)
RKRKRKRKRKRNKKMNKKKTGPKTNEKSEFQFCTVCRINHNQGRRHNFFPRHTNSLSSLFGRFQSKLSNVKSSLKNPSLALPSKLTPSSNRFWCIFCDSDIDELGSAFTSGKAIEHLASEDHLRNLKQFLWKYGGGMDKVDSFRITEAEFIKWEKRCKLLKNEAGLSNGPLHGQSNDIQPNYKMMNSFDKNSMHFLESTLSKDVMPLQYDTNENYQVYYSDISKANKVGPLQQAVASPTPLASQPGVYNWNSTYMSQNSQHSLLSTGKDLLVGGFVSSEVHNNQSMANRRAITEGYQNLTQISSGVPEDGKGNVHSGASPPWLEGIEAHGKHEPPGDPRVNTIQKTSKKASKLNPKRVGAAWAEKRKLEMEMEKRGEIVRNNSDADWLPNFGRVWQSGTRKESMKEFKKEKLYPPVASQAETEIKLQPYISKRMEHFLLHLQRRDMDEISSEGVQKNGGIS*

Click here to download the sequence:
Link to NCBI Protein BLAST