Transcript Information: S_Transcript_204142.p1


Annotated TAIR IDAT1G55890.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:20901364-20902560 | Forward length=398
E-Value3E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.47402292276403
Replicate 20.61753354995589
Replicate 30.18771232655064
Condition 2: 8 Hour
Replicate 12.4418385859313
Replicate 22.2770329404302
Replicate 32.5492235049214
Condition 3: 24 Hour
Replicate 10.61143439795556
Replicate 20.28834365873216
Replicate 30.77013876046156


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_204142.p1 GENE.S_Transcript_204142~~S_Transcript_204142.p1 ORF type:complete len:393 (+),score=57.37,PPR_2|PF13041.2|0.00061,PPR_2|PF13041.2|3.5e-07,PPR_2|PF13041.2|1.3e-05,PPR_2|PF13041.2|1.1e-09,PPR_2|PF13041.2|0.00099,PPR_2|PF13041.2|1.2e-12,PPR_2|PF13041.2|5.4e+02,PPR|PF01535.16|1.7e-05,PPR|PF01535.16|0.032,PPR|PF01535.16|6.5e-07,PPR|PF01535.16|7.8e-06,PPR|PF01535.16|1.6,PPR|PF01535.16|3.7e-06,PPR|PF01535.16|15,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|4.9,PPR_1|PF12854.3|4.5e-08,PPR_1|PF12854.3|9.6e-06,PPR_1|PF12854.3|15,PPR_1|PF12854.3|3.2e-07,PPR_1|PF12854.3|0.35,PPR_1|PF12854.3|7.7e+02,PPR_3|PF13812.2|1.6e+02,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|0.21,PPR_3|PF13812.2|0.0033,PPR_3|PF13812.2|0.028,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|0.061,PPR_3|PF13812.2|6.5e+03 S_Transcript_204142:113-1291(+)
ATGTCAAAGACAAACATATACGCTCGTCTCAATCGCATATTTTCCTCCACCAAGAAAACATTACTTCCCAAAACATTAGCTCCACCCGAAACACCGGAAATCCCAACTAACTACACAGAATCCATTAGCGACCTCTTGAATCAGAGAGACCCAGGAAAGCTCGTTCAAAAGTTCAACTCTTTGTCTATTCATCCTTATGTTCGTCGTCGACATAGACTCTATGAAATCATAATCTACCGGCTCACTAGAGCTAATAGATTGTCTCTAATCGAAGATACCCTTGAAACCCAGAAAAAGTACATTTCTGGGGAAGGCTTTGCTTCCCGCCTCATAACCTTGTATGGTAAAGCCGGCATGTTCGATCATGCACACAAGCTGTTCGACGAAATGCCTGAACGAAAATGTGAACGAGGTGTTAGATCCTTCAATGCCCTTTTGGGAGCTGCTGTTGATTCCAAGAAATTTGACAAGGCTTATGAGCTTTTCCGAGAGCTTCCTTCGAAGATATCGGTTAAACCTAGTGTGGAATCGTATGGTATGGCTGTTAATGCTCTTTGTAAATTGGGTTTGCTTGATGAAGCGATTTCGTTGCTAGATGAGATGGAGGAGAATGGATTGAAAATAAGTATTGTTTGTTTCAATACAATTATGGGTTCTCTTTGTAGGAAGGAGGATTTTGTTGAAGCTGAGAAAATAATGGATAGGATGATCAAGAGTGGTGTGAATCCTGATATGTGCAGCTACATTTGCAGGATGCAAGTTCTTACTAGTGAAGGGAAGTTGAGTAATGCAATTGAGTTGTTAGAGCAATTTAAAGGCAAGGGAATAAAACCTAATGTTGGGCTATACAATGTTTTGATTCAAGGGTTCTGTAAAAATGATGATTTAGATGGAGCAAAGAAGTGGTATCACGAATTATTGGAACATAATCTTGAACCGAATAGGAACACGTTCAACATACTTGTTCCTTTCCTGTGTGACAACGTTGATTATGGGTTTGCATACACCGTGTGCACGAAGAAGTTCAAGGGCCTATGCTCAGTTGATGAAGCTATTTTGCAGAATGTGGTTAATGGGTTGGTGAAGAACTCAATGATCAAAGAAGCTGAAACATTAGTCCAGCTAGGAAGGTCTAACAGTTATTTTCCTTACAATCTTGTCATGCCTAGCACCGTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_204142.p1 GENE.S_Transcript_204142~~S_Transcript_204142.p1 ORF type:complete len:393 (+),score=57.37,PPR_2|PF13041.2|0.00061,PPR_2|PF13041.2|3.5e-07,PPR_2|PF13041.2|1.3e-05,PPR_2|PF13041.2|1.1e-09,PPR_2|PF13041.2|0.00099,PPR_2|PF13041.2|1.2e-12,PPR_2|PF13041.2|5.4e+02,PPR|PF01535.16|1.7e-05,PPR|PF01535.16|0.032,PPR|PF01535.16|6.5e-07,PPR|PF01535.16|7.8e-06,PPR|PF01535.16|1.6,PPR|PF01535.16|3.7e-06,PPR|PF01535.16|15,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|4.9,PPR_1|PF12854.3|4.5e-08,PPR_1|PF12854.3|9.6e-06,PPR_1|PF12854.3|15,PPR_1|PF12854.3|3.2e-07,PPR_1|PF12854.3|0.35,PPR_1|PF12854.3|7.7e+02,PPR_3|PF13812.2|1.6e+02,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|0.21,PPR_3|PF13812.2|0.0033,PPR_3|PF13812.2|0.028,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|0.061,PPR_3|PF13812.2|6.5e+03 S_Transcript_204142:113-1291(+)
MSKTNIYARLNRIFSSTKKTLLPKTLAPPETPEIPTNYTESISDLLNQRDPGKLVQKFNSLSIHPYVRRRHRLYEIIIYRLTRANRLSLIEDTLETQKKYISGEGFASRLITLYGKAGMFDHAHKLFDEMPERKCERGVRSFNALLGAAVDSKKFDKAYELFRELPSKISVKPSVESYGMAVNALCKLGLLDEAISLLDEMEENGLKISIVCFNTIMGSLCRKEDFVEAEKIMDRMIKSGVNPDMCSYICRMQVLTSEGKLSNAIELLEQFKGKGIKPNVGLYNVLIQGFCKNDDLDGAKKWYHELLEHNLEPNRNTFNILVPFLCDNVDYGFAYTVCTKKFKGLCSVDEAILQNVVNGLVKNSMIKEAETLVQLGRSNSYFPYNLVMPSTV*

Click here to download the sequence:
Link to NCBI Protein BLAST