Transcript Information: S_Transcript_204180.p1


Annotated TAIR IDAT1G12220.1
Annotated Gene NameDisease resistance protein (CC-NBS-LRR class) family
Annotated Gene Symbol(s)RPS5
Annotation TypeHomolog
Chromosome Positionchr1:4145011-4147680 | Forward length=889
E-Value2E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.96102504460374
Replicate 21.409567110619
Replicate 31.6905841409967
Condition 2: 8 Hour
Replicate 10.94779512520591
Replicate 21.1185924319863
Replicate 30.82894962908261
Condition 3: 24 Hour
Replicate 11.334965102203
Replicate 21.573875803913
Replicate 30.77067357904521


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_204180.p1 GENE.S_Transcript_204180~~S_Transcript_204180.p1 ORF type:3prime_partial len:360 (+),score=70.91,NB-ARC|PF00931.18|1.4e+03,NB-ARC|PF00931.18|1.4e-41,Arch_ATPase|PF01637.14|6e-06,AAA_16|PF13191.2|2.2e+03,AAA_16|PF13191.2|1.7e-05,AAA_22|PF13401.2|5.7e+03,AAA_22|PF13401.2|2.2e-05 S_Transcript_204180:388-1464(+)
ATGTCCGTAGTCTTATTTGTAGCAGGCATTGATGAAGAGGGCGCTAGATTGCTATATAGAACTAGTAACTCTGACCTTTGTCAGAAGATGGAGATCCTCAGAGCAAAAATGAAACATCTGACTGCACGAGAAGTTGATGTTCGTATGGAAATTGAAAATGCTGAGATACAGCCTGGGAAGAGACGGAGAGAGGAGGTTGTTAACTGGTTGACCACTGTTGAACTTAAAAAAATTGAAGTACAAATCATGGAAAAGGAAGTCCAGCCACAGGGGTTGATGTCATCTAACTCACTGCTCAGAGATCGCATTGAAAGAGTTACTAAAGATGTCCAAGAACTGATCCAGGATGGCAGATTCCCAAGTGGACTAGTATTGGATGATTATAAGAGCAGAGCATTGCCATTCCCGACTAAAGGATTGGTAGGCGAAATGTTTCAGAAGAATATTGAAACAATCCTGACATGGTTGAAAGATCCAGTTCCATTTTTGATTAGTGTGCATGGTATGGGAGGGGTGGGGAAAACGACACTGTTGAAATACATATATAATCATCTTCTAAAAGAATCTGATTTGGGTTGGCGTGTTGTTTGGGTGACTGTGTCACAAGATTGCAGTCTGTACATGTTACAACACAAAATAGCCCATGCAATTGCTGGTAAGAATGATTTAGATGAAGATGAGGAGAGGAGAGCAGCGGAGTTGCATAATATGTTAGGGAAGATGGGGAAAGCTGTGATCATCCTTGATGATGTGTGGGAAACCTTCATGTTGGATAAAGTTGGAATACCTCTTGGAGAGAACAGTTGCAAGATTATTGTGAGTACTCGGTCCCTGGAAGTGTGCCGCAAAATGGGGAGTGAAAACTTCATTGTCAAAGTGAAACCTCTGTCTATAAGTGAAGCTTGGATGTTGTTTGTTGACAAGCTTCAGAATTATGAGAAACTAGCAACCGAAATGAAGCAAATAGCAGCATTAGTTGCTAACGAGTGTGGTTGTTTGCCACTTGCGATCATCACAATTGCTGTTAGCATGAGAGGCATTTACAATAGACCAGAGTGGTTGAATGCTTTGGATGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_204180.p1 GENE.S_Transcript_204180~~S_Transcript_204180.p1 ORF type:3prime_partial len:360 (+),score=70.91,NB-ARC|PF00931.18|1.4e+03,NB-ARC|PF00931.18|1.4e-41,Arch_ATPase|PF01637.14|6e-06,AAA_16|PF13191.2|2.2e+03,AAA_16|PF13191.2|1.7e-05,AAA_22|PF13401.2|5.7e+03,AAA_22|PF13401.2|2.2e-05 S_Transcript_204180:388-1464(+)
MSVVLFVAGIDEEGARLLYRTSNSDLCQKMEILRAKMKHLTAREVDVRMEIENAEIQPGKRRREEVVNWLTTVELKKIEVQIMEKEVQPQGLMSSNSLLRDRIERVTKDVQELIQDGRFPSGLVLDDYKSRALPFPTKGLVGEMFQKNIETILTWLKDPVPFLISVHGMGGVGKTTLLKYIYNHLLKESDLGWRVVWVTVSQDCSLYMLQHKIAHAIAGKNDLDEDEERRAAELHNMLGKMGKAVIILDDVWETFMLDKVGIPLGENSCKIIVSTRSLEVCRKMGSENFIVKVKPLSISEAWMLFVDKLQNYEKLATEMKQIAALVANECGCLPLAIITIAVSMRGIYNRPEWLNALDE

Click here to download the sequence:
Link to NCBI Protein BLAST