Transcript Information: S_Transcript_204520.p1


Annotated TAIR IDAT3G62970.1
Annotated Gene Namezinc finger (C3HC4-type RING finger) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:23270636-23272698 | Forward length=287
E-Value4.1E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1242424738546
Replicate 24.1110787995369
Replicate 33.8947392971579
Condition 2: 8 Hour
Replicate 16.8877037049125
Replicate 25.5582232645284
Replicate 35.9578456038768
Condition 3: 24 Hour
Replicate 15.0202527276521
Replicate 23.9415324480604
Replicate 34.3864425052376


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_204520.p1 GENE.S_Transcript_204520~~S_Transcript_204520.p1 ORF type:5prime_partial len:161 (+),score=14.65,zinc_ribbon_6|PF14599.2|5.9e+03,zinc_ribbon_6|PF14599.2|5.9e-26 S_Transcript_204520:2-484(+)
TGTCACGTCTGCAAATTCTATGATGACGAGATTAGTAAAAAACAATTCCATTGTGATGATTGTGGGATTTGCAGGGTTGGTGGTCGTGAGAACTTCTTCCATTGCCCGAAGTGTGGGTCTTGCTATTCAATGGGTCTCCGTGATAATCACTTGTGTGTGGAGAATGCCATGAAGAATTGTTGTCCCATCTGTTACGAGTATCTTTTCGACTCAATCAAAGGCACAACAGTTATGAGGTACCGATGTCCCATATGCTCCAAGTCGACGGTGGACATGTCTAGAAACTGGGAAAGATTAGATGAGGAGATTGGAGCTACTGCCATGCCTGATGAATATCGATATGAGGTTTTAATCCTCTGCAATGATTGCACCAATACAAGCAGAGTGAAATTTCACATATTCGGGCACAAGTGCAGTCACTGCAACTCCTACAATACTCGTGTAACCCAGAAATTAGATTCTCAGCAGGAGCCATCATCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_204520.p1 GENE.S_Transcript_204520~~S_Transcript_204520.p1 ORF type:5prime_partial len:161 (+),score=14.65,zinc_ribbon_6|PF14599.2|5.9e+03,zinc_ribbon_6|PF14599.2|5.9e-26 S_Transcript_204520:2-484(+)
CHVCKFYDDEISKKQFHCDDCGICRVGGRENFFHCPKCGSCYSMGLRDNHLCVENAMKNCCPICYEYLFDSIKGTTVMRYRCPICSKSTVDMSRNWERLDEEIGATAMPDEYRYEVLILCNDCTNTSRVKFHIFGHKCSHCNSYNTRVTQKLDSQQEPSS*

Click here to download the sequence:
Link to NCBI Protein BLAST