Transcript Information: S_Transcript_204593.p1


Annotated TAIR IDAT5G25930.1
Annotated Gene NameProtein kinase family protein with leucine-rich repeat domain
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:9050880-9053978 | Forward length=1005
E-Value3E-114
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.10884663081873
Replicate 20.045118179054223
Replicate 30.15086082685972
Condition 2: 8 Hour
Replicate 10.26166123088507
Replicate 20.27450121030339
Replicate 30.43590690398735
Condition 3: 24 Hour
Replicate 10.26803538025269
Replicate 20.18538905174926
Replicate 30.25789411457174


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_204593.p1 GENE.S_Transcript_204593~~S_Transcript_204593.p1 ORF type:5prime_partial len:489 (+),score=56.59,Pkinase|PF00069.21|5.4e+03,Pkinase|PF00069.21|1.9e-45,Pkinase_Tyr|PF07714.13|5e-41,LRR_8|PF13855.2|0.00021,LRR_8|PF13855.2|0.62,LRR_1|PF00560.29|0.48,LRR_1|PF00560.29|2.3,LRR_1|PF00560.29|58,LRR_4|PF12799.3|0.00026,LRR_4|PF12799.3|6.4,LRR_4|PF12799.3|6e+03 S_Transcript_204593:1-1467(+)
ATAGGGCAGCTCCAAGGGCTGACTTACCTTGACCTTAGCTTCAACAGTTTTAGTGGTAACATTCCACGCTCAATAGGGCAGCTCCAATGGCTGACCACCTTGAACTTAGAATCAAATGATTTGATTGGCGAAATTCCAGTAAGTTTGGCTAAGATGTCTAGCCTTGAGGTTTTAAGGTTGGCCCAAAATAACTTGGTGGGTGAGATACCAAGAGAGATATTCTTGCTCAGGAATTTGAGTTCCTCGGACTTTCAGGGCAACCCCAACTTGTGTTCCGACATCAAAACTTTTGGTATTCCTAGATGCACATATGCATTCGGCCAGGTCTCGACTTTCTCTTTTAACAGATATCTTGCAGCAATAATTCTACTCCCTGTTGCAATTGCTATGATGATTTTGTACTTGTTATTCTCCAAAGTCATCATTCCCCGACAAAGAAAAAGGCGACAACACAATGTTGAGCAACCATCCTGGACAATGACTACGTTTCACAACCTGAGCTTTACCAAAACAGACATTCTGTGTGGTCTGATAGAAACCAATGTGATTGGGTCGGGTGGATCAGGAAAGATATACAGCGTTGATATTACTAATTCAGGTGGTAAGGTTGCTGTTAAAAGAATATGGAATGACACAGAACTCAACTCTGCTCTTGAAAAGCAGTTCAAAGCCGAGGTTGAGATACTCGGCAGAATAAGGCATGTTAACATGGTCAAGTTGCTATGTTGTGTCTCAAAAGTTGATTCAATGCTGCTGGTATATGAGTACATGGAAAACCAGAGCCTCGACAAGTGGCTTCGCCCCAAGAACAAAACGCATCATGAATCATCAGATGTGCGTTCTGCTGTTCTGGATTGGCCGACAAGGTTGCGGATTGCGATTGGAGCTGCAAAGGGACTAAGCTATATGCACCATGACTGCTCTCCACCCATCATTCATAGAGACGTGAAGACAAGCAATGTCTTGTTGGACTGTGAATTCAATGCCAAAATTGCAGACTTTGGACTAGCCAAGATGTTAGCCTATGAAGCAGGAGATCCTCGCACTGCTTCTGTTGTTGCAGGATCTTTCAGTTACATTGCCCCAGAGTATTGGCGGACACAACGACTGAATGAGAAGATTGACATATACAGCTTCGGAGTGGTGCTCCTAGAACTAGCGACAGGGAAGGAACCGTGCAAGGGGAATAACTATTTGAACCTGGCAGACTGGTCATGGAAGCACTACTGCGAGGGCCAACCTATTGCAGATGCCTTAGACAACAACATCAAAGAGCCCTGCTTCCTGGACGAAATGATTAAAGTGTTTACAATAGGACTCATGTGCACCAGTAAAGTCCCTTCATCGAGACCATCGATGAAGCAGGTTCAGCAAATGCTCACTGACTGCAGCCACTGTGAGGCTTCTACAGACAGCCTGAGCCAAGAAGATGGTGTCACTCCCTTCTTAAGCGACAACTCTACTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_204593.p1 GENE.S_Transcript_204593~~S_Transcript_204593.p1 ORF type:5prime_partial len:489 (+),score=56.59,Pkinase|PF00069.21|5.4e+03,Pkinase|PF00069.21|1.9e-45,Pkinase_Tyr|PF07714.13|5e-41,LRR_8|PF13855.2|0.00021,LRR_8|PF13855.2|0.62,LRR_1|PF00560.29|0.48,LRR_1|PF00560.29|2.3,LRR_1|PF00560.29|58,LRR_4|PF12799.3|0.00026,LRR_4|PF12799.3|6.4,LRR_4|PF12799.3|6e+03 S_Transcript_204593:1-1467(+)
IGQLQGLTYLDLSFNSFSGNIPRSIGQLQWLTTLNLESNDLIGEIPVSLAKMSSLEVLRLAQNNLVGEIPREIFLLRNLSSSDFQGNPNLCSDIKTFGIPRCTYAFGQVSTFSFNRYLAAIILLPVAIAMMILYLLFSKVIIPRQRKRRQHNVEQPSWTMTTFHNLSFTKTDILCGLIETNVIGSGGSGKIYSVDITNSGGKVAVKRIWNDTELNSALEKQFKAEVEILGRIRHVNMVKLLCCVSKVDSMLLVYEYMENQSLDKWLRPKNKTHHESSDVRSAVLDWPTRLRIAIGAAKGLSYMHHDCSPPIIHRDVKTSNVLLDCEFNAKIADFGLAKMLAYEAGDPRTASVVAGSFSYIAPEYWRTQRLNEKIDIYSFGVVLLELATGKEPCKGNNYLNLADWSWKHYCEGQPIADALDNNIKEPCFLDEMIKVFTIGLMCTSKVPSSRPSMKQVQQMLTDCSHCEASTDSLSQEDGVTPFLSDNST*

Click here to download the sequence:
Link to NCBI Protein BLAST