Transcript Information: S_Transcript_204639.p4


Annotated TAIR IDAT3G26855.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:9898680-9899350 | Reverse length=163
E-Value1E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.78853336993127
Replicate 20.65371228318562
Replicate 30.81967715927114
Condition 2: 8 Hour
Replicate 10.63186341680394
Replicate 20.16571739733131
Replicate 30.47368550233292
Condition 3: 24 Hour
Replicate 10.48544185534654
Replicate 20.33576017150144
Replicate 31.3078097098949


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_204639.p4 GENE.S_Transcript_204639~~S_Transcript_204639.p4 ORF type:complete len:135 (+),score=8.54,zf-RVT|PF13966.2|2e-09 S_Transcript_204639:2712-3116(+)
ATGAAACTTCCCCATAGGAACAAATTGTTGATCTGGAGAATAAGCAATACCTGCCTCCCCATAAAGGTAGAGATAAAGAAGAGGATTCCTTCATTTGATGATATGTGTTTATGGTGTGGAAACAGACTAGAGGATTACACACACCTCTTTTTCCTCTGTCCTTTTGCAAAAAGTATGTGGTTTAGTTGCCTAAGAATCAAAGCAGATTCACTGTCTCATTGGACAATTCAATCTTGGCTGAAAGCTATCCTTGACCCCTCAAGACTGGGAATCTCAGATAAGCAAAGTAGAGAAGAATTTACAATCAAGAGTGGGATCCTTATAGACCTTATATGGTCAGCCAGAAACAGAACCTTACACGAGAATGTACAACCAAACACTGATATCTACAAGAGCATGCTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_204639.p4 GENE.S_Transcript_204639~~S_Transcript_204639.p4 ORF type:complete len:135 (+),score=8.54,zf-RVT|PF13966.2|2e-09 S_Transcript_204639:2712-3116(+)
MKLPHRNKLLIWRISNTCLPIKVEIKKRIPSFDDMCLWCGNRLEDYTHLFFLCPFAKSMWFSCLRIKADSLSHWTIQSWLKAILDPSRLGISDKQSREEFTIKSGILIDLIWSARNRTLHENVQPNTDIYKSML*

Click here to download the sequence:
Link to NCBI Protein BLAST