Transcript Information: S_Transcript_204642.p2


Annotated TAIR IDAT3G31430.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast hits to 291 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:12795861-12796871 | Reverse length=336
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.072514989741636
Replicate 20.060116592799768
Replicate 30.15075806062889
Condition 2: 8 Hour
Replicate 10.29053665282197
Replicate 20.24383486255833
Replicate 30.11616265724786
Condition 3: 24 Hour
Replicate 10.41665990309035
Replicate 20.18526276492927
Replicate 30.13744983327039


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_204642.p2 GENE.S_Transcript_204642~~S_Transcript_204642.p2 ORF type:5prime_partial len:367 (+),score=77.45,zf-CCHC_4|PF14392.2|8.1e-12 S_Transcript_204642:2-1102(+)
CAAATCCATGGCTTACCATGGGATAAACTCACTGAAAAGAATGCTATTTCTATTGGAAAAGTTTTTGGCTGTGTATTGGGTACAGATGTTGTACCAGAACAGAGACTCATTACTAGGGGATACCTTAGGGTTAGAGTGGAACTTGACCTCACTAAACCACTCCCCAGGGGCTTATTCCTAAAGATTGGGGATTCCCGCTCTTGGATTCCTTTTAAAATAGAGAGAGTGGCGGATTTCTGCTACAAATGTGGCATTCTGGGGCATGAAAAAAGAGAGTGTAAATCATCCAATATTCTAAAGTTTTCACCCCCTGATGCTGGATATGATAATAATCTTAGAGCTACTGACCTGAAGGATTGGTACTCAACTTTTAAGCCTGTCAGTGGTTTGAACGATTCTGGTACAGTTAAAACAGAACAGGACTCCCCTGGGGTGCCCTCCCCCCTTGCTATTGGTCCTGTCCTAGATAAGGGTTGTCACCCTCCTGCTCGCAAAGTCTCCTCTGGTATTGTGATCAAGGAACCAAAGCCTGACCCTAATATTGTGAATATCAAGAACAATGGAGATGGAGAAGTTGGTACTACTGGTGAACAGGTGGACAAGGGGAAAGGATTTGATAAGGGCAAAGACAGTGAGACTAGAGTTACCCTTGCAGCTACTGATGAGGTGGAGAATCCGGCAAAGGATCAACTGGTAAAAGGGAAAGGAAAAATGAGTGGATCCAACCCCCCTATTGGTGCGCTAGCACGTCTATCACTGAAAAGAGGCACAAGTACTCAGGAAGACCATCTACAGAATCCGCACACTAAGGTCCTGCGACTGGAACCACCGAATGCCCACTTTATTCCAGAATTCCATCCTGGAAATGATAGTCCAGTTGATGATGGTAAGCAGAAAAGAAGAACTTCATCATGCAGGAGAATAGCTTCACAAAAAAAGGTGACAAAAAAGACAGAGATACATGTGACCTCCGTCCATAGGAATACTGAAATCAATGTGGTGGAGGAAAATGTTGTTGAAGAGTCGCTGAAAGAGTTTGATTCTATCCAATCAGAAAAGGCTGAGGAGGCGGGCCAGACCATGCCCCCAACCTTCCCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_204642.p2 GENE.S_Transcript_204642~~S_Transcript_204642.p2 ORF type:5prime_partial len:367 (+),score=77.45,zf-CCHC_4|PF14392.2|8.1e-12 S_Transcript_204642:2-1102(+)
QIHGLPWDKLTEKNAISIGKVFGCVLGTDVVPEQRLITRGYLRVRVELDLTKPLPRGLFLKIGDSRSWIPFKIERVADFCYKCGILGHEKRECKSSNILKFSPPDAGYDNNLRATDLKDWYSTFKPVSGLNDSGTVKTEQDSPGVPSPLAIGPVLDKGCHPPARKVSSGIVIKEPKPDPNIVNIKNNGDGEVGTTGEQVDKGKGFDKGKDSETRVTLAATDEVENPAKDQLVKGKGKMSGSNPPIGALARLSLKRGTSTQEDHLQNPHTKVLRLEPPNAHFIPEFHPGNDSPVDDGKQKRRTSSCRRIASQKKVTKKTEIHVTSVHRNTEINVVEENVVEESLKEFDSIQSEKAEEAGQTMPPTFP*

Click here to download the sequence:
Link to NCBI Protein BLAST