Transcript Information: S_Transcript_204727.p1


Annotated TAIR IDAT1G11290.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)CRR22
Annotation TypeHomolog
Chromosome Positionchr1:3791454-3793883 | Reverse length=809
E-Value7E-96
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.58342161223836
Replicate 21.0789559817334
Replicate 30.80861912002296
Condition 2: 8 Hour
Replicate 12.1936742147472
Replicate 22.2635934542725
Replicate 33.0553913093144
Condition 3: 24 Hour
Replicate 10.69992038165479
Replicate 21.0701293830316
Replicate 31.573719465412


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_204727.p1 GENE.S_Transcript_204727~~S_Transcript_204727.p1 ORF type:complete len:593 (+),score=107.17,PPR_2|PF13041.2|0.00074,PPR_2|PF13041.2|7.1e-05,PPR_2|PF13041.2|1.7,PPR_2|PF13041.2|6.3e-11,PPR_2|PF13041.2|1.8e+03,PPR_2|PF13041.2|1.1e-08,PPR_2|PF13041.2|9,PPR_2|PF13041.2|8.1e-13,PPR_2|PF13041.2|0.27,PPR_2|PF13041.2|1.8e+03,PPR|PF01535.16|0.00048,PPR|PF01535.16|0.24,PPR|PF01535.16|0.04,PPR|PF01535.16|2.1e-05,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|6.4,PPR|PF01535.16|3.6e-05,PPR|PF01535.16|0.98,PPR|PF01535.16|4.6e-08,PPR|PF01535.16|0.007,PPR|PF01535.16|90,PPR_1|PF12854.3|0.46,PPR_1|PF12854.3|0.98,PPR_1|PF12854.3|8.1e+03,PPR_1|PF12854.3|18,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|6.9e+02,PPR_1|PF12854.3|0.0016,PPR_1|PF12854.3|2.4e+03,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|0.00025,PPR_1|PF12854.3|0.037,PPR_1|PF12854.3|1.9e+02,PPR_3|PF13812.2|0.021,PPR_3|PF13812.2|4.4e+02,PPR_3|PF13812.2|8.8e+03,PPR_3|PF13812.2|4.3e+02,PPR_3|PF13812.2|0.0056,PPR_3|PF13812.2|97,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.00043,PPR_3|PF13812.2|8.5e+02,PPR_3|PF13812.2|9.1e+02,PPR_3|PF13812.2|7.2e+03 S_Transcript_204727:85-1863(+)
ATGAATAAAATTTGCATGTCCGAACATTCGGGTTCGTTGCTACACTTATGCTCCAAGATCAAGGCTTTACGACCTGGATTTGCCCTTCATGCTGCTGCCCTCAAGGCTGGCTTGTTGTCCAACCTCATTCTTTCCAATCATGTTCTCAATATGTACGCAAAATGTGGTAAAATCTCTCTTGCACACCAATTATTCGACGAAATGCCTGAAAGAAATCTTGTTTCATGGGCATCTCTTATTTCTGGCTATGATCAAGCTGGGGACCCACTTAAGGCAATTAAGCTATACTCTAAGTTGAACTTGAATTTGGTTGTTCCCAATGAATTTGTATTTGCTAGTGTTCTGAGTGCCTGTGCTAGTCTCTCATATTTGACATTTGGTCAACAAGTTCATGCTCAGTCTTTCAAGCTTGGTTGTGATTCTATATCCTTTGTTTCCAATGCTCTAATATCCTTGTACATGAAATGTGGTTTCTGTGATGATGCTTTAGCAGTGTTTACTAGTTTGGCAAAACCAAATTCTGTTTCTTACAATGCACTGATTGCTGGTTTTGTCGAAAACCGACAGCCAGTCAAGGGGCTTGAGTTGTTCCAGCTAATGCATCAGCATGGTCTTGTTCCAGACCAGTTTAGTTTTGCTTGTGTACTCGATGCATGTTCTAGTACAGAAGATCTCAAGGCGGGTTTACAGTTGCACTGCCAATCGATTAAGTTCAATCTTGATTGCACCCTTTTTGTTGGAAACGTGATCATTGCTATGTACTCAAAGTTTAAATTGATAGATTGTGTGGAAAAGGTATTCGGGCTGATTGAAGAAAAGGATGTCATTTCATGGAACACCCTTATTGCTGCTTATTGTCATAGTGACGATTACATGAAGGGTATAGATCTATTTAGAGAGCTGATGAAAGATATATCTGTCAGCCCTGATGATTTCACTTTTGCCAGTGCTCTTGCTGCCTGTGCAGGGACCGCTTCCATATGTCATGGAAAACAAATTCATGCTCGCCTAGTCAGGACAAGGCGAAATTGGGACATAGTGGTGGAGAATGCACTAGTGAGCATGTATGCTAAATGTGGTTGCGTTCTGTACGCTTATACCATGTTTAATCAAATCAGGCATCCCAATCTTGTCTCGTGGAATAGTATGATAGCTGGTTTTGGAAACCACGGGCTTGGGAAGAAAGCCTTAGATCTTTTTGGACATATGCAAGAAAGTGGTTTGAAGCCAGATACTGTCACATTTGTTGCACTTCTGATTGCTTGCAATCATGCTGGTCTTGTGGACGAGGGTGAGTCCTTATTCAAGTCCATGGAAGGTCTTTATGAAATAAGCCCTTCTGCAGAGCATATGTCTTGCTTCATTGATATTCTAGGACGATCTGGAAGATTAGCTCATGCTGAAAGGTATATGAGAAAGTTCCAGTTTGAGAATGATCCTGTGGTTTTGGGAAGTCTACTATCAACATGCCGATTGCGTGGTGAAGTTGACATGGGACAACGTCTGGGGGAACTTCTACTGAAACTTCAACCTACAAGTACTTCACCTTTTGTCTTGCTCTCAAACTTGTATGCTTCAGATAAGATATGGTCTGGTGTTGCAGAAACAAGGAAGATGCTTAAAGGAAGTGGTTTGATAAAGGAGCCTGGTTACAGTCTTATTGAAATCAAGGGAAAGGTGGAGAAGTTCACAATAGGGGACCTTCCTCGTTCAAGCATCAGTGGCATTAAAGACGTTCTCAGACTTGTACGTCTGGAAGCAAGTGAGCTGCTAACGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_204727.p1 GENE.S_Transcript_204727~~S_Transcript_204727.p1 ORF type:complete len:593 (+),score=107.17,PPR_2|PF13041.2|0.00074,PPR_2|PF13041.2|7.1e-05,PPR_2|PF13041.2|1.7,PPR_2|PF13041.2|6.3e-11,PPR_2|PF13041.2|1.8e+03,PPR_2|PF13041.2|1.1e-08,PPR_2|PF13041.2|9,PPR_2|PF13041.2|8.1e-13,PPR_2|PF13041.2|0.27,PPR_2|PF13041.2|1.8e+03,PPR|PF01535.16|0.00048,PPR|PF01535.16|0.24,PPR|PF01535.16|0.04,PPR|PF01535.16|2.1e-05,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|6.4,PPR|PF01535.16|3.6e-05,PPR|PF01535.16|0.98,PPR|PF01535.16|4.6e-08,PPR|PF01535.16|0.007,PPR|PF01535.16|90,PPR_1|PF12854.3|0.46,PPR_1|PF12854.3|0.98,PPR_1|PF12854.3|8.1e+03,PPR_1|PF12854.3|18,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|6.9e+02,PPR_1|PF12854.3|0.0016,PPR_1|PF12854.3|2.4e+03,PPR_1|PF12854.3|1.3e+02,PPR_1|PF12854.3|0.00025,PPR_1|PF12854.3|0.037,PPR_1|PF12854.3|1.9e+02,PPR_3|PF13812.2|0.021,PPR_3|PF13812.2|4.4e+02,PPR_3|PF13812.2|8.8e+03,PPR_3|PF13812.2|4.3e+02,PPR_3|PF13812.2|0.0056,PPR_3|PF13812.2|97,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.00043,PPR_3|PF13812.2|8.5e+02,PPR_3|PF13812.2|9.1e+02,PPR_3|PF13812.2|7.2e+03 S_Transcript_204727:85-1863(+)
MNKICMSEHSGSLLHLCSKIKALRPGFALHAAALKAGLLSNLILSNHVLNMYAKCGKISLAHQLFDEMPERNLVSWASLISGYDQAGDPLKAIKLYSKLNLNLVVPNEFVFASVLSACASLSYLTFGQQVHAQSFKLGCDSISFVSNALISLYMKCGFCDDALAVFTSLAKPNSVSYNALIAGFVENRQPVKGLELFQLMHQHGLVPDQFSFACVLDACSSTEDLKAGLQLHCQSIKFNLDCTLFVGNVIIAMYSKFKLIDCVEKVFGLIEEKDVISWNTLIAAYCHSDDYMKGIDLFRELMKDISVSPDDFTFASALAACAGTASICHGKQIHARLVRTRRNWDIVVENALVSMYAKCGCVLYAYTMFNQIRHPNLVSWNSMIAGFGNHGLGKKALDLFGHMQESGLKPDTVTFVALLIACNHAGLVDEGESLFKSMEGLYEISPSAEHMSCFIDILGRSGRLAHAERYMRKFQFENDPVVLGSLLSTCRLRGEVDMGQRLGELLLKLQPTSTSPFVLLSNLYASDKIWSGVAETRKMLKGSGLIKEPGYSLIEIKGKVEKFTIGDLPRSSISGIKDVLRLVRLEASELLT*

Click here to download the sequence:
Link to NCBI Protein BLAST