Transcript Information: S_Transcript_204859.p1


Annotated TAIR IDAT1G62360.1
Annotated Gene NameKNOX/ELK homeobox transcription factor
Annotated Gene Symbol(s)STM, BUM1, SHL, WAM1, BUM, WAM
Annotation TypeOrtholog
Chromosome Positionchr1:23058796-23061722 | Reverse length=382
E-Value8E-150
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.2705019223176
Replicate 23.8694738608564
Replicate 30.90795008411572
Condition 2: 8 Hour
Replicate 12.0341141533265
Replicate 20.48185520147103
Replicate 34.525518414596
Condition 3: 24 Hour
Replicate 10
Replicate 20.97628726790419
Replicate 31.4745195190683


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_204859.p1 GENE.S_Transcript_204859~~S_Transcript_204859.p1 ORF type:5prime_partial len:325 (+),score=74.60,KNOX1|PF03790.9|3e-23,KNOX1|PF03790.9|4.6e+03,KNOX2|PF03791.9|8.4e-21,Homeobox_KN|PF05920.7|5.6e-17,Homeobox_KN|PF05920.7|1.8e+03,ELK|PF03789.9|9.1e-11,Homeobox|PF00046.25|5.2e-07 S_Transcript_204859:2-976(+)
TTTATGATCCCTCCTCACCATCATCCCTGTCATCATAATTACCATCATCATGGCATGAGCAACAAACATCATCATCATCAACAACAACAGCATCAGCAACTTGGCGGTGTTGTTTGTTCTGGATATGATCTTACGAACAACATGAGCAACACCAACAACACCAGCAACAGTAATGGGAGTATTAAGGCCAAAATAATGGCTCATCCTCACTACCCTCGTTTGCTTTCTGCTTATGTTAACTGTCAGAAGGTGGGAGCACCACCAGAAGTGGTGGCGCGGCTGGAGGAAGCAGAAGGGATGGCAAGAGGAGGAGAAGGGGTGGTGGGTGGATATGTAGGAGAAGATCCAGCTTTAGATCAATTTATGGAAGCTTATTGTGAGATGCTTACCAAATATGAGCAAGAACTAACCAAGCCTTTTAAAGAAGCTATGCTTTTCCTTTCAAGGGTTGAATGCCAATTCAAAGCCCTTACCCTTTCTTCTTCTTCTGATTCTCCTTCTTCTGCAGCTTGTGGCGAGGGTTTTGATAGGAATGGATCGTCTGAAGAAGATATCGATGTAAACAACAACTTAATTGATCCTTCGGCTGAAGATCGAGAGCTGAAAGGCCAGCTACTCCGCAAGTATAGCGGATATTTGGGAAGTTTGAGACAGGAGTTCTTGAAAAAGAGGAAGAAGGGAAAACTGCCAAAGGAAGCCAGGCAACAATTGCTTGATTGGTGGAGTAGGCACTACAAATGGCCTTACCCATCTGAATCCCAGAAGCTTGCCCTAGCTGAGTCAACAGGGCTAGATCAGAAGCAGATAAACAACTGGTTCATTAACCAAAGGAAGCGACATTGGAAGCCCTCGGAGGACATGCAGTTTGTGGTGATGGATGCCGCTTCTCATTCCCATGCTCATCCCCACTACAATTACATGGACAATGTCCTCGGAAATCCATTTCCGATGGATGTCTCCCCTACGCTTATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_204859.p1 GENE.S_Transcript_204859~~S_Transcript_204859.p1 ORF type:5prime_partial len:325 (+),score=74.60,KNOX1|PF03790.9|3e-23,KNOX1|PF03790.9|4.6e+03,KNOX2|PF03791.9|8.4e-21,Homeobox_KN|PF05920.7|5.6e-17,Homeobox_KN|PF05920.7|1.8e+03,ELK|PF03789.9|9.1e-11,Homeobox|PF00046.25|5.2e-07 S_Transcript_204859:2-976(+)
FMIPPHHHPCHHNYHHHGMSNKHHHHQQQQHQQLGGVVCSGYDLTNNMSNTNNTSNSNGSIKAKIMAHPHYPRLLSAYVNCQKVGAPPEVVARLEEAEGMARGGEGVVGGYVGEDPALDQFMEAYCEMLTKYEQELTKPFKEAMLFLSRVECQFKALTLSSSSDSPSSAACGEGFDRNGSSEEDIDVNNNLIDPSAEDRELKGQLLRKYSGYLGSLRQEFLKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAASHSHAHPHYNYMDNVLGNPFPMDVSPTLM*

Click here to download the sequence:
Link to NCBI Protein BLAST