Transcript Information: S_Transcript_204947.p1


Annotated TAIR IDAT5G42220.1
Annotated Gene NameUbiquitin-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:16872962-16877455 | Forward length=879
E-Value1E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2177501029317
Replicate 21.0214254424775
Replicate 30.85383037424077
Condition 2: 8 Hour
Replicate 12.1720304952636
Replicate 22.2786142133055
Replicate 31.3815827151377
Condition 3: 24 Hour
Replicate 11.8204069575495
Replicate 21.6788008575072
Replicate 32.8024493783462


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_204947.p1 GENE.S_Transcript_204947~~S_Transcript_204947.p1 ORF type:5prime_partial len:108 (+),score=7.54,ubiquitin|PF00240.19|2.1e-13 S_Transcript_204947:1-324(+)
GTCGTCAAGAATATGCCTGTGTCATCCTTTAAGGAGAAAATTGCTGATGAAATTGGTGTACCTGTGGTTCAGCAACGACTTATTTTTAGGGGGAAGGTATTGAAGGATGAATACTCACTCTCCGAGTATCGTATCCTTCAAGTAGTTTGTATTTATTTTCCTTTCTTATTGATCAAAAGAAGCTGTTTAAGCAAGCTTTATTACTTTTGTCTTTGTAGTATGCATGCATGTAAGGTTGTATGGATTGTTTGGGGTACTAAGATTTATCTGAGATCTGAATGTGTTCTGTTTTTGACATTTCTACTAAATCTTTGGTTTGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_204947.p1 GENE.S_Transcript_204947~~S_Transcript_204947.p1 ORF type:5prime_partial len:108 (+),score=7.54,ubiquitin|PF00240.19|2.1e-13 S_Transcript_204947:1-324(+)
VVKNMPVSSFKEKIADEIGVPVVQQRLIFRGKVLKDEYSLSEYRILQVVCIYFPFLLIKRSCLSKLYYFCLCSMHACKVVWIVWGTKIYLRSECVLFLTFLLNLWFA*

Click here to download the sequence:
Link to NCBI Protein BLAST